Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
FNDC3AQ9Y2H6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FNDC3AQ9Y2H6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 RCN1P1-201ENST00000400413 996 ntBASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 AC012306.2-201ENST00000609350 630 ntBASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 KRT16P6-202ENST00000425692 1426 ntBASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.92■□□□□ 0.78
FNDC3AQ9Y2H6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.91■□□□□ 0.78
FNDC3AQ9Y2H6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.91■□□□□ 0.78
FNDC3AQ9Y2H6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FNDC3AQ9Y2H6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
FNDC3AQ9Y2H6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
FNDC3AQ9Y2H6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
FNDC3AQ9Y2H6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.91■□□□□ 0.78
FNDC3AQ9Y2H6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.91■□□□□ 0.78
FNDC3AQ9Y2H6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FNDC3AQ9Y2H6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.91■□□□□ 0.78
FNDC3AQ9Y2H6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.91■□□□□ 0.78
FNDC3AQ9Y2H6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FNDC3AQ9Y2H6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FNDC3AQ9Y2H6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FNDC3AQ9Y2H6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FNDC3AQ9Y2H6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FNDC3AQ9Y2H6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.91■□□□□ 0.78
FNDC3AQ9Y2H6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
FNDC3AQ9Y2H6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FNDC3AQ9Y2H6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FNDC3AQ9Y2H6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FNDC3AQ9Y2H6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
FNDC3AQ9Y2H6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FNDC3AQ9Y2H6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FNDC3AQ9Y2H6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
FNDC3AQ9Y2H6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.9■□□□□ 0.78
FNDC3AQ9Y2H6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FNDC3AQ9Y2H6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.9■□□□□ 0.78
FNDC3AQ9Y2H6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FNDC3AQ9Y2H6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.9■□□□□ 0.78
FNDC3AQ9Y2H6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.9■□□□□ 0.78
FNDC3AQ9Y2H6 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.9■□□□□ 0.78
FNDC3AQ9Y2H6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.9■□□□□ 0.78
FNDC3AQ9Y2H6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
FNDC3AQ9Y2H6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
FNDC3AQ9Y2H6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
FNDC3AQ9Y2H6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
FNDC3AQ9Y2H6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FNDC3AQ9Y2H6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FNDC3AQ9Y2H6 TCF3P1-201ENST00000423021 1937 ntBASIC19.9■□□□□ 0.78
FNDC3AQ9Y2H6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FNDC3AQ9Y2H6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FNDC3AQ9Y2H6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.9■□□□□ 0.78
FNDC3AQ9Y2H6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
FNDC3AQ9Y2H6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
FNDC3AQ9Y2H6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
FNDC3AQ9Y2H6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
FNDC3AQ9Y2H6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms