Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
COL17A1Q9UMD9 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
COL17A1Q9UMD9 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
COL17A1Q9UMD9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
COL17A1Q9UMD9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
COL17A1Q9UMD9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
COL17A1Q9UMD9 BX276092.5-203ENST00000456199 560 ntBASIC29.66■■■□□ 2.34
COL17A1Q9UMD9 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC29.66■■■□□ 2.34
COL17A1Q9UMD9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC29.66■■■□□ 2.34
COL17A1Q9UMD9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC29.66■■■□□ 2.34
COL17A1Q9UMD9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
COL17A1Q9UMD9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC29.66■■■□□ 2.34
COL17A1Q9UMD9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
COL17A1Q9UMD9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
COL17A1Q9UMD9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
COL17A1Q9UMD9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
COL17A1Q9UMD9 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC29.65■■■□□ 2.34
COL17A1Q9UMD9 PHB2-202ENST00000440277 996 ntTSL 5 BASIC29.65■■■□□ 2.34
COL17A1Q9UMD9 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC29.65■■■□□ 2.34
COL17A1Q9UMD9 AL662844.1-201ENST00000546340 181 ntBASIC29.65■■■□□ 2.34
COL17A1Q9UMD9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC29.65■■■□□ 2.34
COL17A1Q9UMD9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
COL17A1Q9UMD9 CALM3-211ENST00000598871 561 ntTSL 4 BASIC29.65■■■□□ 2.34
COL17A1Q9UMD9 LINC02084-201ENST00000606069 1096 ntBASIC29.65■■■□□ 2.34
COL17A1Q9UMD9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC29.65■■■□□ 2.34
COL17A1Q9UMD9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.34
COL17A1Q9UMD9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
COL17A1Q9UMD9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC29.64■■■□□ 2.34
COL17A1Q9UMD9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
COL17A1Q9UMD9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC29.64■■■□□ 2.34
COL17A1Q9UMD9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC29.64■■■□□ 2.34
COL17A1Q9UMD9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
COL17A1Q9UMD9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC29.64■■■□□ 2.34
COL17A1Q9UMD9 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC29.64■■■□□ 2.34
COL17A1Q9UMD9 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC29.64■■■□□ 2.34
COL17A1Q9UMD9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
COL17A1Q9UMD9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC29.64■■■□□ 2.34
COL17A1Q9UMD9 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.33
COL17A1Q9UMD9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC29.64■■■□□ 2.33
COL17A1Q9UMD9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
COL17A1Q9UMD9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
COL17A1Q9UMD9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC29.64■■■□□ 2.33
COL17A1Q9UMD9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
COL17A1Q9UMD9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC29.63■■■□□ 2.33
COL17A1Q9UMD9 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
COL17A1Q9UMD9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC29.63■■■□□ 2.33
COL17A1Q9UMD9 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC29.63■■■□□ 2.33
COL17A1Q9UMD9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC29.63■■■□□ 2.33
COL17A1Q9UMD9 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC29.63■■■□□ 2.33
COL17A1Q9UMD9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
COL17A1Q9UMD9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
COL17A1Q9UMD9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC29.63■■■□□ 2.33
COL17A1Q9UMD9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
COL17A1Q9UMD9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC29.63■■■□□ 2.33
COL17A1Q9UMD9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
COL17A1Q9UMD9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
COL17A1Q9UMD9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC29.62■■■□□ 2.33
COL17A1Q9UMD9 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC29.62■■■□□ 2.33
COL17A1Q9UMD9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
COL17A1Q9UMD9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
COL17A1Q9UMD9 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
COL17A1Q9UMD9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
COL17A1Q9UMD9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
COL17A1Q9UMD9 RNA5SP419-201ENST00000515908 135 ntBASIC29.62■■■□□ 2.33
COL17A1Q9UMD9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC29.62■■■□□ 2.33
COL17A1Q9UMD9 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC29.62■■■□□ 2.33
COL17A1Q9UMD9 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
COL17A1Q9UMD9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC29.62■■■□□ 2.33
COL17A1Q9UMD9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC29.62■■■□□ 2.33
COL17A1Q9UMD9 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC29.62■■■□□ 2.33
COL17A1Q9UMD9 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
COL17A1Q9UMD9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
COL17A1Q9UMD9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
COL17A1Q9UMD9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
COL17A1Q9UMD9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
COL17A1Q9UMD9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
COL17A1Q9UMD9 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC29.61■■■□□ 2.33
COL17A1Q9UMD9 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC29.61■■■□□ 2.33
COL17A1Q9UMD9 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
COL17A1Q9UMD9 AF228730.7-201ENST00000641842 219 ntBASIC29.61■■■□□ 2.33
COL17A1Q9UMD9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC29.61■■■□□ 2.33
COL17A1Q9UMD9 TPSP2-201ENST00000561760 610 ntBASIC29.61■■■□□ 2.33
COL17A1Q9UMD9 VPS51-217ENST00000639871 243 ntTSL 5 BASIC29.61■■■□□ 2.33
COL17A1Q9UMD9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
COL17A1Q9UMD9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC29.61■■■□□ 2.33
COL17A1Q9UMD9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC29.6■■■□□ 2.33
COL17A1Q9UMD9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC29.6■■■□□ 2.33
COL17A1Q9UMD9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
COL17A1Q9UMD9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC29.6■■■□□ 2.33
COL17A1Q9UMD9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
COL17A1Q9UMD9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC29.6■■■□□ 2.33
COL17A1Q9UMD9 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC29.6■■■□□ 2.33
COL17A1Q9UMD9 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
COL17A1Q9UMD9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC29.6■■■□□ 2.33
COL17A1Q9UMD9 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC29.6■■■□□ 2.33
COL17A1Q9UMD9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
COL17A1Q9UMD9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
COL17A1Q9UMD9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC29.59■■■□□ 2.33
COL17A1Q9UMD9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
COL17A1Q9UMD9 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC29.59■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms