Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HMG20BQ9P0W2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.79■■□□□ 1.4
HMG20BQ9P0W2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HMG20BQ9P0W2 AL445675.2-201ENST00000620291 557 ntBASIC23.79■■□□□ 1.4
HMG20BQ9P0W2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HMG20BQ9P0W2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
HMG20BQ9P0W2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
HMG20BQ9P0W2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
HMG20BQ9P0W2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.79■■□□□ 1.4
HMG20BQ9P0W2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HMG20BQ9P0W2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.79■■□□□ 1.4
HMG20BQ9P0W2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC23.79■■□□□ 1.4
HMG20BQ9P0W2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HMG20BQ9P0W2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HMG20BQ9P0W2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HMG20BQ9P0W2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.78■■□□□ 1.4
HMG20BQ9P0W2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.78■■□□□ 1.4
HMG20BQ9P0W2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HMG20BQ9P0W2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HMG20BQ9P0W2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HMG20BQ9P0W2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.78■■□□□ 1.4
HMG20BQ9P0W2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
HMG20BQ9P0W2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
HMG20BQ9P0W2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.78■■□□□ 1.4
HMG20BQ9P0W2 ABBA01031674.1-201ENST00000635145 728 ntBASIC23.78■■□□□ 1.4
HMG20BQ9P0W2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HMG20BQ9P0W2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HMG20BQ9P0W2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
HMG20BQ9P0W2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
HMG20BQ9P0W2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
HMG20BQ9P0W2 AFG3L1P-217ENST00000557444 2447 ntBASIC23.78■■□□□ 1.4
HMG20BQ9P0W2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HMG20BQ9P0W2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
HMG20BQ9P0W2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HMG20BQ9P0W2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HMG20BQ9P0W2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HMG20BQ9P0W2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
HMG20BQ9P0W2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.77■■□□□ 1.4
HMG20BQ9P0W2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.77■■□□□ 1.4
HMG20BQ9P0W2 AC211429.1-201ENST00000415277 523 ntBASIC23.77■■□□□ 1.4
HMG20BQ9P0W2 PPP1R14BP5-201ENST00000440334 435 ntBASIC23.77■■□□□ 1.4
HMG20BQ9P0W2 AC116562.2-201ENST00000507042 360 ntBASIC23.77■■□□□ 1.4
HMG20BQ9P0W2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC23.77■■□□□ 1.4
HMG20BQ9P0W2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23.77■■□□□ 1.4
HMG20BQ9P0W2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
HMG20BQ9P0W2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HMG20BQ9P0W2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.77■■□□□ 1.4
HMG20BQ9P0W2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
HMG20BQ9P0W2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HMG20BQ9P0W2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
HMG20BQ9P0W2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.77■■□□□ 1.4
HMG20BQ9P0W2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HMG20BQ9P0W2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HMG20BQ9P0W2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
HMG20BQ9P0W2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
HMG20BQ9P0W2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
HMG20BQ9P0W2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.76■■□□□ 1.39
HMG20BQ9P0W2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.76■■□□□ 1.39
HMG20BQ9P0W2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HMG20BQ9P0W2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HMG20BQ9P0W2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
HMG20BQ9P0W2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HMG20BQ9P0W2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.76■■□□□ 1.39
HMG20BQ9P0W2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.76■■□□□ 1.39
HMG20BQ9P0W2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC23.76■■□□□ 1.39
HMG20BQ9P0W2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.76■■□□□ 1.39
HMG20BQ9P0W2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.76■■□□□ 1.39
HMG20BQ9P0W2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC23.76■■□□□ 1.39
HMG20BQ9P0W2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC23.76■■□□□ 1.39
HMG20BQ9P0W2 HLA-A-209ENST00000638375 975 ntBASIC23.76■■□□□ 1.39
HMG20BQ9P0W2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
HMG20BQ9P0W2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.76■■□□□ 1.39
HMG20BQ9P0W2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
HMG20BQ9P0W2 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC23.76■■□□□ 1.39
HMG20BQ9P0W2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.75■■□□□ 1.39
HMG20BQ9P0W2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
HMG20BQ9P0W2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
HMG20BQ9P0W2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.75■■□□□ 1.39
HMG20BQ9P0W2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HMG20BQ9P0W2 MESTP1-201ENST00000404287 994 ntBASIC23.75■■□□□ 1.39
HMG20BQ9P0W2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.75■■□□□ 1.39
HMG20BQ9P0W2 AC004980.1-204ENST00000429707 299 ntBASIC23.75■■□□□ 1.39
HMG20BQ9P0W2 RBM17P1-201ENST00000453646 1190 ntBASIC23.75■■□□□ 1.39
HMG20BQ9P0W2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.75■■□□□ 1.39
HMG20BQ9P0W2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
HMG20BQ9P0W2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
HMG20BQ9P0W2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.75■■□□□ 1.39
HMG20BQ9P0W2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HMG20BQ9P0W2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HMG20BQ9P0W2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
HMG20BQ9P0W2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
HMG20BQ9P0W2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HMG20BQ9P0W2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.75■■□□□ 1.39
HMG20BQ9P0W2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.75■■□□□ 1.39
HMG20BQ9P0W2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HMG20BQ9P0W2 AC079598.2-202ENST00000546624 1451 ntBASIC23.75■■□□□ 1.39
HMG20BQ9P0W2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
HMG20BQ9P0W2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HMG20BQ9P0W2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HMG20BQ9P0W2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms