Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SLC52A1Q9NWF4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
SLC52A1Q9NWF4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
SLC52A1Q9NWF4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC28.04■■■□□ 2.08
SLC52A1Q9NWF4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SLC52A1Q9NWF4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC28.03■■■□□ 2.08
SLC52A1Q9NWF4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
SLC52A1Q9NWF4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC28.03■■■□□ 2.08
SLC52A1Q9NWF4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
SLC52A1Q9NWF4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC28.03■■■□□ 2.08
SLC52A1Q9NWF4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC28.03■■■□□ 2.08
SLC52A1Q9NWF4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC28.03■■■□□ 2.08
SLC52A1Q9NWF4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
SLC52A1Q9NWF4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
SLC52A1Q9NWF4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
SLC52A1Q9NWF4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
SLC52A1Q9NWF4 HCG4P8-203ENST00000443049 980 ntBASIC28.03■■■□□ 2.08
SLC52A1Q9NWF4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC28.03■■■□□ 2.08
SLC52A1Q9NWF4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC28.03■■■□□ 2.08
SLC52A1Q9NWF4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC28.03■■■□□ 2.08
SLC52A1Q9NWF4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC28.03■■■□□ 2.08
SLC52A1Q9NWF4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC28.03■■■□□ 2.08
SLC52A1Q9NWF4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
SLC52A1Q9NWF4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
SLC52A1Q9NWF4 FEM1AP1-201ENST00000431297 1995 ntBASIC28.02■■■□□ 2.08
SLC52A1Q9NWF4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
SLC52A1Q9NWF4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SLC52A1Q9NWF4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SLC52A1Q9NWF4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC28.02■■■□□ 2.08
SLC52A1Q9NWF4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC28.02■■■□□ 2.08
SLC52A1Q9NWF4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC28.02■■■□□ 2.08
SLC52A1Q9NWF4 AC083849.1-201ENST00000615227 514 ntBASIC28.02■■■□□ 2.08
SLC52A1Q9NWF4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SLC52A1Q9NWF4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
SLC52A1Q9NWF4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SLC52A1Q9NWF4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC28.02■■■□□ 2.08
SLC52A1Q9NWF4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC28.02■■■□□ 2.08
SLC52A1Q9NWF4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
SLC52A1Q9NWF4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.08
SLC52A1Q9NWF4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SLC52A1Q9NWF4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SLC52A1Q9NWF4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
SLC52A1Q9NWF4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SLC52A1Q9NWF4 STARP1-201ENST00000397973 869 ntBASIC28.01■■■□□ 2.07
SLC52A1Q9NWF4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC28.01■■■□□ 2.07
SLC52A1Q9NWF4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC28.01■■■□□ 2.07
SLC52A1Q9NWF4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC28.01■■■□□ 2.07
SLC52A1Q9NWF4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC28.01■■■□□ 2.07
SLC52A1Q9NWF4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC28.01■■■□□ 2.07
SLC52A1Q9NWF4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC28.01■■■□□ 2.07
SLC52A1Q9NWF4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC28.01■■■□□ 2.07
SLC52A1Q9NWF4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC28.01■■■□□ 2.07
SLC52A1Q9NWF4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SLC52A1Q9NWF4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SLC52A1Q9NWF4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC28.01■■■□□ 2.07
SLC52A1Q9NWF4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SLC52A1Q9NWF4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
SLC52A1Q9NWF4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC28■■■□□ 2.07
SLC52A1Q9NWF4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC28■■■□□ 2.07
SLC52A1Q9NWF4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
SLC52A1Q9NWF4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC28■■■□□ 2.07
SLC52A1Q9NWF4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC28■■■□□ 2.07
SLC52A1Q9NWF4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC28■■■□□ 2.07
SLC52A1Q9NWF4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
SLC52A1Q9NWF4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
SLC52A1Q9NWF4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC28■■■□□ 2.07
SLC52A1Q9NWF4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC28■■■□□ 2.07
SLC52A1Q9NWF4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
SLC52A1Q9NWF4 VENTXP5-201ENST00000523979 775 ntBASIC28■■■□□ 2.07
SLC52A1Q9NWF4 CLEC4GP1-201ENST00000596555 870 ntBASIC28■■■□□ 2.07
SLC52A1Q9NWF4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
SLC52A1Q9NWF4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
SLC52A1Q9NWF4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC28■■■□□ 2.07
SLC52A1Q9NWF4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
SLC52A1Q9NWF4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2.07
SLC52A1Q9NWF4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
SLC52A1Q9NWF4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC28■■■□□ 2.07
SLC52A1Q9NWF4 AC026310.3-201ENST00000625186 2373 ntBASIC28■■■□□ 2.07
SLC52A1Q9NWF4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC28■■■□□ 2.07
SLC52A1Q9NWF4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC28■■■□□ 2.07
SLC52A1Q9NWF4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC27.99■■■□□ 2.07
SLC52A1Q9NWF4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
SLC52A1Q9NWF4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC27.99■■■□□ 2.07
SLC52A1Q9NWF4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC27.99■■■□□ 2.07
SLC52A1Q9NWF4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC27.99■■■□□ 2.07
SLC52A1Q9NWF4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC27.99■■■□□ 2.07
SLC52A1Q9NWF4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
SLC52A1Q9NWF4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
SLC52A1Q9NWF4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC27.99■■■□□ 2.07
SLC52A1Q9NWF4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC27.99■■■□□ 2.07
SLC52A1Q9NWF4 ZNF444P1-201ENST00000559497 298 ntBASIC27.99■■■□□ 2.07
SLC52A1Q9NWF4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC27.99■■■□□ 2.07
SLC52A1Q9NWF4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC27.99■■■□□ 2.07
SLC52A1Q9NWF4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC27.99■■■□□ 2.07
SLC52A1Q9NWF4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
SLC52A1Q9NWF4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
SLC52A1Q9NWF4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC27.98■■■□□ 2.07
SLC52A1Q9NWF4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC27.98■■■□□ 2.07
SLC52A1Q9NWF4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC27.98■■■□□ 2.07
SLC52A1Q9NWF4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC27.98■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms