Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.8■■□□□ 1.4
ECHDC1Q9NTX5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ECHDC1Q9NTX5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ECHDC1Q9NTX5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
ECHDC1Q9NTX5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
ECHDC1Q9NTX5 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
ECHDC1Q9NTX5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
ECHDC1Q9NTX5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
ECHDC1Q9NTX5 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
ECHDC1Q9NTX5 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC23.79■■□□□ 1.4
ECHDC1Q9NTX5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
ECHDC1Q9NTX5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.79■■□□□ 1.4
ECHDC1Q9NTX5 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.79■■□□□ 1.4
ECHDC1Q9NTX5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.79■■□□□ 1.4
ECHDC1Q9NTX5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
ECHDC1Q9NTX5 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
ECHDC1Q9NTX5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
ECHDC1Q9NTX5 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
ECHDC1Q9NTX5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
ECHDC1Q9NTX5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ECHDC1Q9NTX5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ECHDC1Q9NTX5 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ECHDC1Q9NTX5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ECHDC1Q9NTX5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ECHDC1Q9NTX5 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.78■■□□□ 1.4
ECHDC1Q9NTX5 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC23.78■■□□□ 1.4
ECHDC1Q9NTX5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
ECHDC1Q9NTX5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ECHDC1Q9NTX5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ECHDC1Q9NTX5 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ECHDC1Q9NTX5 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.78■■□□□ 1.4
ECHDC1Q9NTX5 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.78■■□□□ 1.4
ECHDC1Q9NTX5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.78■■□□□ 1.4
ECHDC1Q9NTX5 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.78■■□□□ 1.4
ECHDC1Q9NTX5 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC23.78■■□□□ 1.4
ECHDC1Q9NTX5 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.78■■□□□ 1.4
ECHDC1Q9NTX5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
ECHDC1Q9NTX5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC23.78■■□□□ 1.4
ECHDC1Q9NTX5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ECHDC1Q9NTX5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
ECHDC1Q9NTX5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ECHDC1Q9NTX5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.78■■□□□ 1.4
ECHDC1Q9NTX5 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ECHDC1Q9NTX5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.78■■□□□ 1.4
ECHDC1Q9NTX5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ECHDC1Q9NTX5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC23.77■■□□□ 1.4
ECHDC1Q9NTX5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC23.77■■□□□ 1.4
ECHDC1Q9NTX5 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
ECHDC1Q9NTX5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ECHDC1Q9NTX5 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ECHDC1Q9NTX5 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ECHDC1Q9NTX5 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
ECHDC1Q9NTX5 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC23.77■■□□□ 1.4
ECHDC1Q9NTX5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ECHDC1Q9NTX5 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ECHDC1Q9NTX5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC23.77■■□□□ 1.4
ECHDC1Q9NTX5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
ECHDC1Q9NTX5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ECHDC1Q9NTX5 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ECHDC1Q9NTX5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
ECHDC1Q9NTX5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.77■■□□□ 1.4
ECHDC1Q9NTX5 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
ECHDC1Q9NTX5 Z82202.1-201ENST00000623446 1880 ntBASIC23.77■■□□□ 1.4
ECHDC1Q9NTX5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 HTR7P1-201ENST00000538670 1336 ntBASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC23.76■■□□□ 1.39
ECHDC1Q9NTX5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC23.75■■□□□ 1.39
ECHDC1Q9NTX5 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ECHDC1Q9NTX5 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
ECHDC1Q9NTX5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ECHDC1Q9NTX5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
ECHDC1Q9NTX5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ECHDC1Q9NTX5 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ECHDC1Q9NTX5 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
ECHDC1Q9NTX5 UBE2SP1-201ENST00000450587 669 ntBASIC23.75■■□□□ 1.39
ECHDC1Q9NTX5 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.75■■□□□ 1.39
ECHDC1Q9NTX5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ECHDC1Q9NTX5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms