Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF304Q9HCX3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF304Q9HCX3 AC099778.1-201ENST00000568593 1911 ntBASIC18.52■□□□□ 0.56
ZNF304Q9HCX3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.52■□□□□ 0.56
ZNF304Q9HCX3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ZNF304Q9HCX3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ZNF304Q9HCX3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 CR392000.1-201ENST00000624770 1228 ntBASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ZNF304Q9HCX3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF304Q9HCX3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF304Q9HCX3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
ZNF304Q9HCX3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF304Q9HCX3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
ZNF304Q9HCX3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF304Q9HCX3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF304Q9HCX3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF304Q9HCX3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.5■□□□□ 0.55
ZNF304Q9HCX3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.5■□□□□ 0.55
ZNF304Q9HCX3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.5■□□□□ 0.55
ZNF304Q9HCX3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.5■□□□□ 0.55
ZNF304Q9HCX3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.5■□□□□ 0.55
ZNF304Q9HCX3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.5■□□□□ 0.55
ZNF304Q9HCX3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.5■□□□□ 0.55
ZNF304Q9HCX3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF304Q9HCX3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.5■□□□□ 0.55
ZNF304Q9HCX3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF304Q9HCX3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.5■□□□□ 0.55
ZNF304Q9HCX3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF304Q9HCX3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF304Q9HCX3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 AC009237.14-201ENST00000609975 1594 ntBASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 KRT16P1-201ENST00000399124 1418 ntBASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.49■□□□□ 0.55
ZNF304Q9HCX3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms