Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KIAA1549Q9HCM3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
KIAA1549Q9HCM3 CYP2D8P-201ENST00000433633 1490 ntBASIC17.45■□□□□ 0.38
KIAA1549Q9HCM3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KIAA1549Q9HCM3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.45■□□□□ 0.38
KIAA1549Q9HCM3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KIAA1549Q9HCM3 AL158211.5-201ENST00000623583 2518 ntBASIC17.45■□□□□ 0.38
KIAA1549Q9HCM3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KIAA1549Q9HCM3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.45■□□□□ 0.38
KIAA1549Q9HCM3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KIAA1549Q9HCM3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KIAA1549Q9HCM3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
KIAA1549Q9HCM3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 AC011506.1-201ENST00000474329 610 ntBASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 KRT18P21-201ENST00000515767 1272 ntBASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
KIAA1549Q9HCM3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KIAA1549Q9HCM3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.43■□□□□ 0.38
KIAA1549Q9HCM3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
KIAA1549Q9HCM3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KIAA1549Q9HCM3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KIAA1549Q9HCM3 MESTP1-201ENST00000404287 994 ntBASIC17.43■□□□□ 0.38
KIAA1549Q9HCM3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KIAA1549Q9HCM3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.43■□□□□ 0.38
KIAA1549Q9HCM3 AC097493.4-201ENST00000641197 219 ntBASIC17.43■□□□□ 0.38
KIAA1549Q9HCM3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.43■□□□□ 0.38
KIAA1549Q9HCM3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
KIAA1549Q9HCM3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
KIAA1549Q9HCM3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.43■□□□□ 0.38
KIAA1549Q9HCM3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KIAA1549Q9HCM3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KIAA1549Q9HCM3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.43■□□□□ 0.38
KIAA1549Q9HCM3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KIAA1549Q9HCM3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.43■□□□□ 0.38
KIAA1549Q9HCM3 PCDHAC2-203ENST00000615316 3011 ntBASIC17.43■□□□□ 0.38
KIAA1549Q9HCM3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.42■□□□□ 0.38
KIAA1549Q9HCM3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.42■□□□□ 0.38
KIAA1549Q9HCM3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.42■□□□□ 0.38
KIAA1549Q9HCM3 AL031985.4-201ENST00000642138 673 ntBASIC17.42■□□□□ 0.38
KIAA1549Q9HCM3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.42■□□□□ 0.38
KIAA1549Q9HCM3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.42■□□□□ 0.38
KIAA1549Q9HCM3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KIAA1549Q9HCM3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.42■□□□□ 0.38
KIAA1549Q9HCM3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KIAA1549Q9HCM3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.42■□□□□ 0.38
KIAA1549Q9HCM3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.42■□□□□ 0.38
KIAA1549Q9HCM3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KIAA1549Q9HCM3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KIAA1549Q9HCM3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KIAA1549Q9HCM3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
KIAA1549Q9HCM3 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.42■□□□□ 0.38
KIAA1549Q9HCM3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.42■□□□□ 0.38
KIAA1549Q9HCM3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.42■□□□□ 0.38
KIAA1549Q9HCM3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
KIAA1549Q9HCM3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KIAA1549Q9HCM3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KIAA1549Q9HCM3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
KIAA1549Q9HCM3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.41■□□□□ 0.38
KIAA1549Q9HCM3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
KIAA1549Q9HCM3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.41■□□□□ 0.38
KIAA1549Q9HCM3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KIAA1549Q9HCM3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.41■□□□□ 0.38
KIAA1549Q9HCM3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KIAA1549Q9HCM3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.41■□□□□ 0.38
KIAA1549Q9HCM3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KIAA1549Q9HCM3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
KIAA1549Q9HCM3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
KIAA1549Q9HCM3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.41■□□□□ 0.38
KIAA1549Q9HCM3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
KIAA1549Q9HCM3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KIAA1549Q9HCM3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.41■□□□□ 0.38
KIAA1549Q9HCM3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KIAA1549Q9HCM3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.41■□□□□ 0.38
KIAA1549Q9HCM3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.4■□□□□ 0.38
KIAA1549Q9HCM3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.4■□□□□ 0.38
KIAA1549Q9HCM3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.4■□□□□ 0.38
KIAA1549Q9HCM3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms