Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PCNX3Q9H6A9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PCNX3Q9H6A9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCNX3Q9H6A9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCNX3Q9H6A9 KRT16P1-201ENST00000399124 1418 ntBASIC17.69■□□□□ 0.42
PCNX3Q9H6A9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.69■□□□□ 0.42
PCNX3Q9H6A9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.69■□□□□ 0.42
PCNX3Q9H6A9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCNX3Q9H6A9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.69■□□□□ 0.42
PCNX3Q9H6A9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCNX3Q9H6A9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.69■□□□□ 0.42
PCNX3Q9H6A9 RPS2P55-201ENST00000397318 883 ntBASIC17.69■□□□□ 0.42
PCNX3Q9H6A9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.69■□□□□ 0.42
PCNX3Q9H6A9 AC107956.1-201ENST00000494359 873 ntBASIC17.69■□□□□ 0.42
PCNX3Q9H6A9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 ZNF815P-204ENST00000434898 1737 ntBASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 AC093484.2-201ENST00000580996 2166 ntBASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCNX3Q9H6A9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PCNX3Q9H6A9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PCNX3Q9H6A9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCNX3Q9H6A9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCNX3Q9H6A9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.66■□□□□ 0.42
PCNX3Q9H6A9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.66■□□□□ 0.42
PCNX3Q9H6A9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCNX3Q9H6A9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.66■□□□□ 0.42
PCNX3Q9H6A9 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.66■□□□□ 0.42
PCNX3Q9H6A9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCNX3Q9H6A9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCNX3Q9H6A9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.66■□□□□ 0.42
PCNX3Q9H6A9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.66■□□□□ 0.42
PCNX3Q9H6A9 Z99916.2-201ENST00000604037 246 ntBASIC17.66■□□□□ 0.42
PCNX3Q9H6A9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.66■□□□□ 0.42
PCNX3Q9H6A9 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCNX3Q9H6A9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCNX3Q9H6A9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCNX3Q9H6A9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCNX3Q9H6A9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.66■□□□□ 0.42
PCNX3Q9H6A9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCNX3Q9H6A9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
PCNX3Q9H6A9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms