Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF41Q9H4P4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.05■■□□□ 1.28
RNF41Q9H4P4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC23.05■■□□□ 1.28
RNF41Q9H4P4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF41Q9H4P4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF41Q9H4P4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC23.04■■□□□ 1.28
RNF41Q9H4P4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
RNF41Q9H4P4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
RNF41Q9H4P4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF41Q9H4P4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.04■■□□□ 1.28
RNF41Q9H4P4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.04■■□□□ 1.28
RNF41Q9H4P4 KSR1P1-201ENST00000446298 240 ntBASIC23.04■■□□□ 1.28
RNF41Q9H4P4 RPS2P4-201ENST00000476944 856 ntBASIC23.04■■□□□ 1.28
RNF41Q9H4P4 AC093827.2-201ENST00000512654 315 ntBASIC23.04■■□□□ 1.28
RNF41Q9H4P4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF41Q9H4P4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF41Q9H4P4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF41Q9H4P4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
RNF41Q9H4P4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.04■■□□□ 1.28
RNF41Q9H4P4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF41Q9H4P4 AC125437.2-201ENST00000625180 2167 ntBASIC23.04■■□□□ 1.28
RNF41Q9H4P4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF41Q9H4P4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF41Q9H4P4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
RNF41Q9H4P4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF41Q9H4P4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF41Q9H4P4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC23.03■■□□□ 1.28
RNF41Q9H4P4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF41Q9H4P4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC23.03■■□□□ 1.28
RNF41Q9H4P4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.03■■□□□ 1.28
RNF41Q9H4P4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.03■■□□□ 1.28
RNF41Q9H4P4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF41Q9H4P4 AL445675.2-201ENST00000620291 557 ntBASIC23.03■■□□□ 1.28
RNF41Q9H4P4 AL049637.2-201ENST00000641778 930 ntBASIC23.03■■□□□ 1.28
RNF41Q9H4P4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RNF41Q9H4P4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RNF41Q9H4P4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RNF41Q9H4P4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.03■■□□□ 1.28
RNF41Q9H4P4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RNF41Q9H4P4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF41Q9H4P4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC23.02■■□□□ 1.28
RNF41Q9H4P4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF41Q9H4P4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.02■■□□□ 1.28
RNF41Q9H4P4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF41Q9H4P4 TREX1-205ENST00000625293 1783 ntBASIC23.02■■□□□ 1.28
RNF41Q9H4P4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
RNF41Q9H4P4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF41Q9H4P4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF41Q9H4P4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF41Q9H4P4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF41Q9H4P4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF41Q9H4P4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RNF41Q9H4P4 SAPCD2P4-201ENST00000424595 1171 ntBASIC23.02■■□□□ 1.28
RNF41Q9H4P4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.02■■□□□ 1.28
RNF41Q9H4P4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.02■■□□□ 1.28
RNF41Q9H4P4 HLA-A-209ENST00000638375 975 ntBASIC23.02■■□□□ 1.28
RNF41Q9H4P4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF41Q9H4P4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF41Q9H4P4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
RNF41Q9H4P4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.01■■□□□ 1.27
RNF41Q9H4P4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.01■■□□□ 1.27
RNF41Q9H4P4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.01■■□□□ 1.27
RNF41Q9H4P4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF41Q9H4P4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.01■■□□□ 1.27
RNF41Q9H4P4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF41Q9H4P4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF41Q9H4P4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF41Q9H4P4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF41Q9H4P4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF41Q9H4P4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF41Q9H4P4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC23.01■■□□□ 1.27
RNF41Q9H4P4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC23.01■■□□□ 1.27
RNF41Q9H4P4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
RNF41Q9H4P4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.01■■□□□ 1.27
RNF41Q9H4P4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC23.01■■□□□ 1.27
RNF41Q9H4P4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC23.01■■□□□ 1.27
RNF41Q9H4P4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF41Q9H4P4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC23.01■■□□□ 1.27
RNF41Q9H4P4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.01■■□□□ 1.27
RNF41Q9H4P4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
RNF41Q9H4P4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF41Q9H4P4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF41Q9H4P4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF41Q9H4P4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
RNF41Q9H4P4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23■■□□□ 1.27
RNF41Q9H4P4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF41Q9H4P4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF41Q9H4P4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC23■■□□□ 1.27
RNF41Q9H4P4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC23■■□□□ 1.27
RNF41Q9H4P4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC23■■□□□ 1.27
RNF41Q9H4P4 AC113410.3-201ENST00000623366 203 ntBASIC23■■□□□ 1.27
RNF41Q9H4P4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC23■■□□□ 1.27
RNF41Q9H4P4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF41Q9H4P4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF41Q9H4P4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23■■□□□ 1.27
RNF41Q9H4P4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23■■□□□ 1.27
RNF41Q9H4P4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
RNF41Q9H4P4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
RNF41Q9H4P4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC23■■□□□ 1.27
RNF41Q9H4P4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms