Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
UBQLN3Q9H347 AL121906.2-201ENST00000621597 723 ntBASIC18.07■□□□□ 0.48
UBQLN3Q9H347 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN3Q9H347 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.07■□□□□ 0.48
UBQLN3Q9H347 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
UBQLN3Q9H347 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.07■□□□□ 0.48
UBQLN3Q9H347 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN3Q9H347 BX323043.1-201ENST00000641006 1765 ntBASIC18.07■□□□□ 0.48
UBQLN3Q9H347 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.07■□□□□ 0.48
UBQLN3Q9H347 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN3Q9H347 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 AC005332.7-201ENST00000614046 2005 ntBASIC18.05■□□□□ 0.48
UBQLN3Q9H347 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 PRKY-204ENST00000533551 1019 ntBASIC18.05■□□□□ 0.48
UBQLN3Q9H347 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
UBQLN3Q9H347 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN3Q9H347 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN3Q9H347 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
UBQLN3Q9H347 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN3Q9H347 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
UBQLN3Q9H347 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN3Q9H347 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN3Q9H347 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN3Q9H347 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN3Q9H347 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.04■□□□□ 0.48
UBQLN3Q9H347 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.04■□□□□ 0.48
UBQLN3Q9H347 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.04■□□□□ 0.48
UBQLN3Q9H347 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN3Q9H347 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN3Q9H347 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN3Q9H347 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
UBQLN3Q9H347 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.04■□□□□ 0.48
UBQLN3Q9H347 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN3Q9H347 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.04■□□□□ 0.48
UBQLN3Q9H347 AC110285.5-201ENST00000611501 352 ntBASIC18.04■□□□□ 0.48
UBQLN3Q9H347 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.04■□□□□ 0.48
UBQLN3Q9H347 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.04■□□□□ 0.48
UBQLN3Q9H347 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.04■□□□□ 0.48
UBQLN3Q9H347 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
UBQLN3Q9H347 AC093484.2-201ENST00000580996 2166 ntBASIC18.04■□□□□ 0.48
UBQLN3Q9H347 AC098818.2-201ENST00000564925 2320 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms