Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP3-3Q9BYR6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC12.05□□□□□ -0.48
KRTAP3-3Q9BYR6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC12.05□□□□□ -0.48
KRTAP3-3Q9BYR6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC12.05□□□□□ -0.48
KRTAP3-3Q9BYR6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP3-3Q9BYR6 CEACAMP3-201ENST00000473762 1548 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP3-3Q9BYR6 PDPN-210ENST00000513143 1305 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP3-3Q9BYR6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP3-3Q9BYR6 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP3-3Q9BYR6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP3-3Q9BYR6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP3-3Q9BYR6 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.05□□□□□ -0.48
KRTAP3-3Q9BYR6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP3-3Q9BYR6 NCLP2-201ENST00000416078 1462 ntBASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 OR7E91P-201ENST00000400027 866 ntBASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 AC004022.2-201ENST00000413824 193 ntBASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 AL445070.1-201ENST00000414631 714 ntTSL 3 BASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 RPL12P19-201ENST00000429825 486 ntBASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 GTF2IP7-202ENST00000436677 309 ntBASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 SNX18P8-201ENST00000455120 874 ntBASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 AC116353.2-201ENST00000505332 712 ntBASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 UGT2B29P-201ENST00000509021 973 ntBASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 MLIP-209ENST00000509997 1032 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 AC119751.1-201ENST00000513357 765 ntBASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 AL117694.1-201ENST00000555136 300 ntBASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 MIR3665-201ENST00000578708 105 ntBASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 MTCO2P2-201ENST00000591258 225 ntBASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 AC027319.1-201ENST00000591657 511 ntTSL 3 BASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 AF131215.7-201ENST00000602443 707 ntBASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 AC010894.5-201ENST00000624428 951 ntBASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 OR7E91P-202ENST00000642062 1198 ntBASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 ERN1-208ENST00000606895 2068 ntBASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
KRTAP3-3Q9BYR6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 GUCY1A3-213ENST00000621234 1788 ntTSL 5 BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 MALAT1-201ENST00000508832 1519 ntTSL 2 BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 OR2T1-201ENST00000366474 1110 ntBASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 DNASE2B-201ENST00000370662 1130 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 HBD-202ENST00000380299 785 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 TRGV6-201ENST00000417928 299 ntBASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 AC004906.1-201ENST00000423194 969 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 ANKRD44-IT1-201ENST00000428191 1069 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 PGGT1BP1-201ENST00000455321 1023 ntBASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 AC096659.1-201ENST00000456728 549 ntTSL 2 BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 NSD1-211ENST00000511258 809 ntTSL 3 BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 VN1R46P-201ENST00000519939 850 ntBASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 AC243972.2-201ENST00000541653 991 ntBASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 TDGP1-201ENST00000543961 1229 ntBASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 RPS3AP4-201ENST00000555161 764 ntBASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 AC060766.7-201ENST00000587012 1212 ntTSL 3 BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 AC079779.3-201ENST00000588842 1200 ntTSL 5 BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 CXCL17-202ENST00000601181 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 AL355802.4-201ENST00000607635 548 ntBASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 OR7A19P-201ENST00000608051 733 ntBASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 TMEM30CP-203ENST00000637814 1035 ntBASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 RPS4XP5-202ENST00000449995 1334 ntBASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 AC136285.1-201ENST00000566092 1447 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP3-3Q9BYR6 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.48
KRTAP3-3Q9BYR6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC12.02□□□□□ -0.48
KRTAP3-3Q9BYR6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
KRTAP3-3Q9BYR6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 APOBEC2-201ENST00000244669 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms