Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO3Q9BXY4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.94■□□□□ 0.46
RSPO3Q9BXY4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
RSPO3Q9BXY4 AC006333.2-201ENST00000607957 2099 ntBASIC17.94■□□□□ 0.46
RSPO3Q9BXY4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.94■□□□□ 0.46
RSPO3Q9BXY4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO3Q9BXY4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO3Q9BXY4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.94■□□□□ 0.46
RSPO3Q9BXY4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO3Q9BXY4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RSPO3Q9BXY4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.94■□□□□ 0.46
RSPO3Q9BXY4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.94■□□□□ 0.46
RSPO3Q9BXY4 PNMA6B-201ENST00000538162 1200 ntBASIC17.94■□□□□ 0.46
RSPO3Q9BXY4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.94■□□□□ 0.46
RSPO3Q9BXY4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.94■□□□□ 0.46
RSPO3Q9BXY4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.94■□□□□ 0.46
RSPO3Q9BXY4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO3Q9BXY4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO3Q9BXY4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.94■□□□□ 0.46
RSPO3Q9BXY4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.94■□□□□ 0.46
RSPO3Q9BXY4 AC092368.3-202ENST00000574180 1591 ntBASIC17.94■□□□□ 0.46
RSPO3Q9BXY4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RSPO3Q9BXY4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.94■□□□□ 0.46
RSPO3Q9BXY4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.94■□□□□ 0.46
RSPO3Q9BXY4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RSPO3Q9BXY4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RSPO3Q9BXY4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RSPO3Q9BXY4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RSPO3Q9BXY4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RSPO3Q9BXY4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RSPO3Q9BXY4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RSPO3Q9BXY4 SLC29A4P1-201ENST00000398760 971 ntBASIC17.93■□□□□ 0.46
RSPO3Q9BXY4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.93■□□□□ 0.46
RSPO3Q9BXY4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RSPO3Q9BXY4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.93■□□□□ 0.46
RSPO3Q9BXY4 AC097658.1-201ENST00000475555 843 ntBASIC17.93■□□□□ 0.46
RSPO3Q9BXY4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.93■□□□□ 0.46
RSPO3Q9BXY4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.93■□□□□ 0.46
RSPO3Q9BXY4 MIR4758-201ENST00000577688 71 ntBASIC17.93■□□□□ 0.46
RSPO3Q9BXY4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.93■□□□□ 0.46
RSPO3Q9BXY4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RSPO3Q9BXY4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.93■□□□□ 0.46
RSPO3Q9BXY4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RSPO3Q9BXY4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RSPO3Q9BXY4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RSPO3Q9BXY4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.93■□□□□ 0.46
RSPO3Q9BXY4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 AC120498.8-201ENST00000614275 531 ntBASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RSPO3Q9BXY4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.91■□□□□ 0.46
RSPO3Q9BXY4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.91■□□□□ 0.46
RSPO3Q9BXY4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
RSPO3Q9BXY4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.91■□□□□ 0.46
RSPO3Q9BXY4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.91■□□□□ 0.46
RSPO3Q9BXY4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RSPO3Q9BXY4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RSPO3Q9BXY4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RSPO3Q9BXY4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RSPO3Q9BXY4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RSPO3Q9BXY4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.91■□□□□ 0.46
RSPO3Q9BXY4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.91■□□□□ 0.46
RSPO3Q9BXY4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.91■□□□□ 0.46
RSPO3Q9BXY4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.91■□□□□ 0.46
RSPO3Q9BXY4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.91■□□□□ 0.46
RSPO3Q9BXY4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.91■□□□□ 0.46
RSPO3Q9BXY4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.91■□□□□ 0.46
RSPO3Q9BXY4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RSPO3Q9BXY4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RSPO3Q9BXY4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
RSPO3Q9BXY4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
RSPO3Q9BXY4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RSPO3Q9BXY4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RSPO3Q9BXY4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RSPO3Q9BXY4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RSPO3Q9BXY4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RSPO3Q9BXY4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.9■□□□□ 0.46
RSPO3Q9BXY4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RSPO3Q9BXY4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms