Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMOQ99835 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.51■□□□□ 0.87
SMOQ99835 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMOQ99835 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMOQ99835 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMOQ99835 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SMOQ99835 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMOQ99835 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMOQ99835 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SMOQ99835 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.5■□□□□ 0.87
SMOQ99835 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMOQ99835 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.5■□□□□ 0.87
SMOQ99835 LINC01465-201ENST00000408887 1940 ntBASIC20.5■□□□□ 0.87
SMOQ99835 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMOQ99835 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.5■□□□□ 0.87
SMOQ99835 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
SMOQ99835 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SMOQ99835 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMOQ99835 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SMOQ99835 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.49■□□□□ 0.87
SMOQ99835 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.49■□□□□ 0.87
SMOQ99835 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMOQ99835 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMOQ99835 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMOQ99835 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMOQ99835 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMOQ99835 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMOQ99835 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.49■□□□□ 0.87
SMOQ99835 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.49■□□□□ 0.87
SMOQ99835 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.49■□□□□ 0.87
SMOQ99835 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SMOQ99835 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMOQ99835 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.49■□□□□ 0.87
SMOQ99835 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.49■□□□□ 0.87
SMOQ99835 REXO1L10P-201ENST00000615707 1290 ntBASIC20.49■□□□□ 0.87
SMOQ99835 REXO1L12P-201ENST00000622156 912 ntBASIC20.49■□□□□ 0.87
SMOQ99835 AL031985.4-201ENST00000642138 673 ntBASIC20.49■□□□□ 0.87
SMOQ99835 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMOQ99835 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.49■□□□□ 0.87
SMOQ99835 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMOQ99835 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SMOQ99835 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SMOQ99835 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMOQ99835 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SMOQ99835 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SMOQ99835 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMOQ99835 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMOQ99835 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMOQ99835 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.48■□□□□ 0.87
SMOQ99835 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMOQ99835 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMOQ99835 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMOQ99835 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMOQ99835 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMOQ99835 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SMOQ99835 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.48■□□□□ 0.87
SMOQ99835 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMOQ99835 MESTP1-201ENST00000404287 994 ntBASIC20.48■□□□□ 0.87
SMOQ99835 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.48■□□□□ 0.87
SMOQ99835 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMOQ99835 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.48■□□□□ 0.87
SMOQ99835 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.48■□□□□ 0.87
SMOQ99835 AC116562.2-201ENST00000507042 360 ntBASIC20.48■□□□□ 0.87
SMOQ99835 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.48■□□□□ 0.87
SMOQ99835 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.48■□□□□ 0.87
SMOQ99835 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.48■□□□□ 0.87
SMOQ99835 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMOQ99835 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.48■□□□□ 0.87
SMOQ99835 AC131212.4-201ENST00000623606 975 ntBASIC20.48■□□□□ 0.87
SMOQ99835 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMOQ99835 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMOQ99835 TREX1-205ENST00000625293 1783 ntBASIC20.48■□□□□ 0.87
SMOQ99835 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.48■□□□□ 0.87
SMOQ99835 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMOQ99835 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMOQ99835 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMOQ99835 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.48■□□□□ 0.87
SMOQ99835 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.48■□□□□ 0.87
SMOQ99835 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMOQ99835 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMOQ99835 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.47■□□□□ 0.87
SMOQ99835 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
SMOQ99835 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMOQ99835 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.47■□□□□ 0.87
SMOQ99835 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMOQ99835 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.47■□□□□ 0.87
SMOQ99835 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMOQ99835 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.47■□□□□ 0.87
SMOQ99835 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.47■□□□□ 0.87
SMOQ99835 AC011506.1-201ENST00000474329 610 ntBASIC20.47■□□□□ 0.87
SMOQ99835 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SMOQ99835 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.47■□□□□ 0.87
SMOQ99835 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.47■□□□□ 0.87
SMOQ99835 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.47■□□□□ 0.87
SMOQ99835 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.47■□□□□ 0.87
SMOQ99835 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.47■□□□□ 0.87
SMOQ99835 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.47■□□□□ 0.87
SMOQ99835 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.47■□□□□ 0.87
SMOQ99835 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SMOQ99835 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms