Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 YBX1P10-201ENST00000444752 975 ntBASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB18PQ96TA0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB18PQ96TA0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB18PQ96TA0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PCDHB18PQ96TA0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB18PQ96TA0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PCDHB18PQ96TA0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB18PQ96TA0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB18PQ96TA0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
PCDHB18PQ96TA0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.68■□□□□ 0.9
PCDHB18PQ96TA0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.68■□□□□ 0.9
PCDHB18PQ96TA0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
PCDHB18PQ96TA0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB18PQ96TA0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB18PQ96TA0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PCDHB18PQ96TA0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
PCDHB18PQ96TA0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB18PQ96TA0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB18PQ96TA0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB18PQ96TA0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHB18PQ96TA0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB18PQ96TA0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB18PQ96TA0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
PCDHB18PQ96TA0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB18PQ96TA0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB18PQ96TA0 POM121L13P-201ENST00000422362 380 ntBASIC20.67■□□□□ 0.9
PCDHB18PQ96TA0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHB18PQ96TA0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHB18PQ96TA0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.67■□□□□ 0.9
PCDHB18PQ96TA0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB18PQ96TA0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
PCDHB18PQ96TA0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB18PQ96TA0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHB18PQ96TA0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB18PQ96TA0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PCDHB18PQ96TA0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB18PQ96TA0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHB18PQ96TA0 TEX21P-204ENST00000641479 1693 ntBASIC20.67■□□□□ 0.9
PCDHB18PQ96TA0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB18PQ96TA0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PCDHB18PQ96TA0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHB18PQ96TA0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDHB18PQ96TA0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB18PQ96TA0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB18PQ96TA0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB18PQ96TA0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB18PQ96TA0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDHB18PQ96TA0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHB18PQ96TA0 KRT18P16-201ENST00000510337 1294 ntBASIC20.66■□□□□ 0.9
PCDHB18PQ96TA0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.66■□□□□ 0.9
PCDHB18PQ96TA0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.66■□□□□ 0.9
PCDHB18PQ96TA0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB18PQ96TA0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.66■□□□□ 0.9
PCDHB18PQ96TA0 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.66■□□□□ 0.9
PCDHB18PQ96TA0 KRT8P8-201ENST00000434750 1448 ntBASIC20.66■□□□□ 0.9
PCDHB18PQ96TA0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB18PQ96TA0 AC104417.2-201ENST00000562989 1793 ntBASIC20.66■□□□□ 0.9
PCDHB18PQ96TA0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHB18PQ96TA0 SDHAP1-207ENST00000440850 2000 ntBASIC20.66■□□□□ 0.9
PCDHB18PQ96TA0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB18PQ96TA0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PCDHB18PQ96TA0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB18PQ96TA0 TNXA-203ENST00000507684 2038 ntBASIC20.65■□□□□ 0.9
PCDHB18PQ96TA0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHB18PQ96TA0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB18PQ96TA0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB18PQ96TA0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PCDHB18PQ96TA0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PCDHB18PQ96TA0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
PCDHB18PQ96TA0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHB18PQ96TA0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.65■□□□□ 0.9
PCDHB18PQ96TA0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB18PQ96TA0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB18PQ96TA0 RNA5SP413-201ENST00000516373 109 ntBASIC20.65■□□□□ 0.9
PCDHB18PQ96TA0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.65■□□□□ 0.9
PCDHB18PQ96TA0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB18PQ96TA0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHB18PQ96TA0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHB18PQ96TA0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB18PQ96TA0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms