Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CDK5RAP1Q96SZ6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDK5RAP1Q96SZ6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CDK5RAP1Q96SZ6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CDK5RAP1Q96SZ6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CDK5RAP1Q96SZ6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDK5RAP1Q96SZ6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
CDK5RAP1Q96SZ6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDK5RAP1Q96SZ6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDK5RAP1Q96SZ6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.25■□□□□ 0.83
CDK5RAP1Q96SZ6 MIR6786-201ENST00000616843 113 ntBASIC20.25■□□□□ 0.83
CDK5RAP1Q96SZ6 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.25■□□□□ 0.83
CDK5RAP1Q96SZ6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDK5RAP1Q96SZ6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDK5RAP1Q96SZ6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDK5RAP1Q96SZ6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDK5RAP1Q96SZ6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 RBM17P1-201ENST00000453646 1190 ntBASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 AL160286.2-201ENST00000567150 934 ntBASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP1Q96SZ6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 B3GAT3P1-201ENST00000471720 806 ntBASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.23■□□□□ 0.83
CDK5RAP1Q96SZ6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.22■□□□□ 0.83
CDK5RAP1Q96SZ6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5RAP1Q96SZ6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5RAP1Q96SZ6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5RAP1Q96SZ6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CDK5RAP1Q96SZ6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5RAP1Q96SZ6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDK5RAP1Q96SZ6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5RAP1Q96SZ6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.22■□□□□ 0.83
CDK5RAP1Q96SZ6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.22■□□□□ 0.83
CDK5RAP1Q96SZ6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5RAP1Q96SZ6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5RAP1Q96SZ6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDK5RAP1Q96SZ6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5RAP1Q96SZ6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5RAP1Q96SZ6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5RAP1Q96SZ6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5RAP1Q96SZ6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5RAP1Q96SZ6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.22■□□□□ 0.83
CDK5RAP1Q96SZ6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.22■□□□□ 0.83
CDK5RAP1Q96SZ6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.22■□□□□ 0.83
CDK5RAP1Q96SZ6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms