Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF558Q96NG5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF558Q96NG5 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ZNF558Q96NG5 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
ZNF558Q96NG5 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNF558Q96NG5 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF558Q96NG5 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF558Q96NG5 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNF558Q96NG5 CA15P1-201ENST00000481698 905 ntBASIC20.76■□□□□ 0.91
ZNF558Q96NG5 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.76■□□□□ 0.91
ZNF558Q96NG5 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNF558Q96NG5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
ZNF558Q96NG5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF558Q96NG5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF558Q96NG5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
ZNF558Q96NG5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF558Q96NG5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF558Q96NG5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF558Q96NG5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF558Q96NG5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.75■□□□□ 0.91
ZNF558Q96NG5 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF558Q96NG5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF558Q96NG5 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.75■□□□□ 0.91
ZNF558Q96NG5 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF558Q96NG5 AL031133.1-201ENST00000406807 723 ntBASIC20.75■□□□□ 0.91
ZNF558Q96NG5 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.75■□□□□ 0.91
ZNF558Q96NG5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.75■□□□□ 0.91
ZNF558Q96NG5 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF558Q96NG5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.75■□□□□ 0.91
ZNF558Q96NG5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.75■□□□□ 0.91
ZNF558Q96NG5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF558Q96NG5 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ZNF558Q96NG5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
ZNF558Q96NG5 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF558Q96NG5 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ZNF558Q96NG5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF558Q96NG5 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF558Q96NG5 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ZNF558Q96NG5 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.74■□□□□ 0.91
ZNF558Q96NG5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF558Q96NG5 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF558Q96NG5 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.74■□□□□ 0.91
ZNF558Q96NG5 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF558Q96NG5 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
ZNF558Q96NG5 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ZNF558Q96NG5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.74■□□□□ 0.91
ZNF558Q96NG5 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.74■□□□□ 0.91
ZNF558Q96NG5 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.74■□□□□ 0.91
ZNF558Q96NG5 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.74■□□□□ 0.91
ZNF558Q96NG5 AL031432.5-201ENST00000641059 760 ntBASIC20.74■□□□□ 0.91
ZNF558Q96NG5 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF558Q96NG5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.74■□□□□ 0.91
ZNF558Q96NG5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.74■□□□□ 0.91
ZNF558Q96NG5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF558Q96NG5 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.74■□□□□ 0.91
ZNF558Q96NG5 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF558Q96NG5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF558Q96NG5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF558Q96NG5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ZNF558Q96NG5 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF558Q96NG5 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
ZNF558Q96NG5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF558Q96NG5 LINC01465-201ENST00000408887 1940 ntBASIC20.73■□□□□ 0.91
ZNF558Q96NG5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF558Q96NG5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF558Q96NG5 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF558Q96NG5 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.73■□□□□ 0.91
ZNF558Q96NG5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF558Q96NG5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF558Q96NG5 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNF558Q96NG5 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.73■□□□□ 0.91
ZNF558Q96NG5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
ZNF558Q96NG5 AC011558.1-201ENST00000623459 338 ntBASIC20.73■□□□□ 0.91
ZNF558Q96NG5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ZNF558Q96NG5 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF558Q96NG5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNF558Q96NG5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.73■□□□□ 0.91
ZNF558Q96NG5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ZNF558Q96NG5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF558Q96NG5 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF558Q96NG5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF558Q96NG5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF558Q96NG5 FEM1AP1-201ENST00000431297 1995 ntBASIC20.72■□□□□ 0.91
ZNF558Q96NG5 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF558Q96NG5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF558Q96NG5 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF558Q96NG5 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF558Q96NG5 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.72■□□□□ 0.91
ZNF558Q96NG5 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF558Q96NG5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.72■□□□□ 0.91
ZNF558Q96NG5 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF558Q96NG5 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNF558Q96NG5 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.72■□□□□ 0.91
ZNF558Q96NG5 CKBP1-201ENST00000565489 1086 ntBASIC20.72■□□□□ 0.91
ZNF558Q96NG5 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.72■□□□□ 0.91
ZNF558Q96NG5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
ZNF558Q96NG5 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF558Q96NG5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF558Q96NG5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.71■□□□□ 0.91
ZNF558Q96NG5 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms