Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCD1Q96GM5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.55■□□□□ 0.88
SMARCD1Q96GM5 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCD1Q96GM5 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SMARCD1Q96GM5 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SMARCD1Q96GM5 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCD1Q96GM5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SMARCD1Q96GM5 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCD1Q96GM5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCD1Q96GM5 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.55■□□□□ 0.88
SMARCD1Q96GM5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCD1Q96GM5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.55■□□□□ 0.88
SMARCD1Q96GM5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.55■□□□□ 0.88
SMARCD1Q96GM5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCD1Q96GM5 AC131212.4-201ENST00000623606 975 ntBASIC20.55■□□□□ 0.88
SMARCD1Q96GM5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
SMARCD1Q96GM5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCD1Q96GM5 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCD1Q96GM5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCD1Q96GM5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCD1Q96GM5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.55■□□□□ 0.88
SMARCD1Q96GM5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCD1Q96GM5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.54■□□□□ 0.88
SMARCD1Q96GM5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCD1Q96GM5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCD1Q96GM5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.54■□□□□ 0.88
SMARCD1Q96GM5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCD1Q96GM5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCD1Q96GM5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.54■□□□□ 0.88
SMARCD1Q96GM5 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.54■□□□□ 0.88
SMARCD1Q96GM5 AC004980.1-204ENST00000429707 299 ntBASIC20.54■□□□□ 0.88
SMARCD1Q96GM5 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.54■□□□□ 0.88
SMARCD1Q96GM5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCD1Q96GM5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.54■□□□□ 0.88
SMARCD1Q96GM5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCD1Q96GM5 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCD1Q96GM5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.54■□□□□ 0.88
SMARCD1Q96GM5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SMARCD1Q96GM5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SMARCD1Q96GM5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.54■□□□□ 0.88
SMARCD1Q96GM5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SMARCD1Q96GM5 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.54■□□□□ 0.88
SMARCD1Q96GM5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCD1Q96GM5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCD1Q96GM5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCD1Q96GM5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCD1Q96GM5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCD1Q96GM5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.53■□□□□ 0.88
SMARCD1Q96GM5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCD1Q96GM5 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCD1Q96GM5 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.53■□□□□ 0.88
SMARCD1Q96GM5 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCD1Q96GM5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SMARCD1Q96GM5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SMARCD1Q96GM5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.53■□□□□ 0.88
SMARCD1Q96GM5 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.53■□□□□ 0.88
SMARCD1Q96GM5 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.53■□□□□ 0.88
SMARCD1Q96GM5 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SMARCD1Q96GM5 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCD1Q96GM5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.53■□□□□ 0.88
SMARCD1Q96GM5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SMARCD1Q96GM5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCD1Q96GM5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCD1Q96GM5 PCDHAC2-203ENST00000615316 3011 ntBASIC20.53■□□□□ 0.88
SMARCD1Q96GM5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCD1Q96GM5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.53■□□□□ 0.88
SMARCD1Q96GM5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCD1Q96GM5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.52■□□□□ 0.88
SMARCD1Q96GM5 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCD1Q96GM5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.52■□□□□ 0.88
SMARCD1Q96GM5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCD1Q96GM5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCD1Q96GM5 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SMARCD1Q96GM5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.52■□□□□ 0.88
SMARCD1Q96GM5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.52■□□□□ 0.88
SMARCD1Q96GM5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.52■□□□□ 0.88
SMARCD1Q96GM5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SMARCD1Q96GM5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SMARCD1Q96GM5 AL355075.4-201ENST00000554988 638 ntBASIC20.52■□□□□ 0.88
SMARCD1Q96GM5 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.52■□□□□ 0.88
SMARCD1Q96GM5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCD1Q96GM5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCD1Q96GM5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCD1Q96GM5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.52■□□□□ 0.88
SMARCD1Q96GM5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.52■□□□□ 0.88
SMARCD1Q96GM5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMARCD1Q96GM5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SMARCD1Q96GM5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMARCD1Q96GM5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMARCD1Q96GM5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.52■□□□□ 0.87
SMARCD1Q96GM5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMARCD1Q96GM5 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
SMARCD1Q96GM5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.51■□□□□ 0.87
SMARCD1Q96GM5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms