Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 TREX1-205ENST00000625293 1783 ntBASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 AC004980.1-204ENST00000429707 299 ntBASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 AC026271.3-201ENST00000571884 352 ntBASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 MIR4785-201ENST00000585005 73 ntBASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 CR392000.1-201ENST00000624770 1228 ntBASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ECHDC3Q96DC8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.54■□□□□ 0.72
ECHDC3Q96DC8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ECHDC3Q96DC8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ECHDC3Q96DC8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.54■□□□□ 0.72
ECHDC3Q96DC8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ECHDC3Q96DC8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
ECHDC3Q96DC8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ECHDC3Q96DC8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ECHDC3Q96DC8 NUDT16P1-203ENST00000513809 620 ntBASIC19.54■□□□□ 0.72
ECHDC3Q96DC8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.54■□□□□ 0.72
ECHDC3Q96DC8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ECHDC3Q96DC8 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.54■□□□□ 0.72
ECHDC3Q96DC8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.54■□□□□ 0.72
ECHDC3Q96DC8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.54■□□□□ 0.72
ECHDC3Q96DC8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ECHDC3Q96DC8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ECHDC3Q96DC8 PCDHAC2-203ENST00000615316 3011 ntBASIC19.54■□□□□ 0.72
ECHDC3Q96DC8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ECHDC3Q96DC8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ECHDC3Q96DC8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ECHDC3Q96DC8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.53■□□□□ 0.72
ECHDC3Q96DC8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ECHDC3Q96DC8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.53■□□□□ 0.72
ECHDC3Q96DC8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ECHDC3Q96DC8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ECHDC3Q96DC8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
ECHDC3Q96DC8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.53■□□□□ 0.72
ECHDC3Q96DC8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.53■□□□□ 0.72
ECHDC3Q96DC8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.53■□□□□ 0.72
ECHDC3Q96DC8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.53■□□□□ 0.72
ECHDC3Q96DC8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.53■□□□□ 0.72
ECHDC3Q96DC8 AC026471.5-201ENST00000615068 467 ntBASIC19.53■□□□□ 0.72
ECHDC3Q96DC8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ECHDC3Q96DC8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.53■□□□□ 0.72
ECHDC3Q96DC8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ECHDC3Q96DC8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ECHDC3Q96DC8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ECHDC3Q96DC8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ECHDC3Q96DC8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.53■□□□□ 0.72
ECHDC3Q96DC8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.53■□□□□ 0.72
ECHDC3Q96DC8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
ECHDC3Q96DC8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.52■□□□□ 0.72
ECHDC3Q96DC8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.52■□□□□ 0.72
ECHDC3Q96DC8 KRT17P2-201ENST00000300992 1314 ntBASIC19.52■□□□□ 0.72
ECHDC3Q96DC8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ECHDC3Q96DC8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.52■□□□□ 0.72
ECHDC3Q96DC8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.52■□□□□ 0.72
ECHDC3Q96DC8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ECHDC3Q96DC8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.52■□□□□ 0.72
ECHDC3Q96DC8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
ECHDC3Q96DC8 AC116562.2-201ENST00000507042 360 ntBASIC19.52■□□□□ 0.72
ECHDC3Q96DC8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.52■□□□□ 0.72
ECHDC3Q96DC8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.52■□□□□ 0.72
ECHDC3Q96DC8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ECHDC3Q96DC8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.52■□□□□ 0.72
ECHDC3Q96DC8 AL031985.4-201ENST00000642138 673 ntBASIC19.52■□□□□ 0.72
ECHDC3Q96DC8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ECHDC3Q96DC8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ECHDC3Q96DC8 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.52■□□□□ 0.72
ECHDC3Q96DC8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
ECHDC3Q96DC8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.52■□□□□ 0.71
ECHDC3Q96DC8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ECHDC3Q96DC8 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.52■□□□□ 0.71
ECHDC3Q96DC8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.51■□□□□ 0.71
ECHDC3Q96DC8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC3Q96DC8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.51■□□□□ 0.71
ECHDC3Q96DC8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms