Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
HDAC11Q96DB2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
HDAC11Q96DB2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.06■□□□□ 0.8
HDAC11Q96DB2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC11Q96DB2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDAC11Q96DB2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HDAC11Q96DB2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HDAC11Q96DB2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
HDAC11Q96DB2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDAC11Q96DB2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDAC11Q96DB2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDAC11Q96DB2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDAC11Q96DB2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HDAC11Q96DB2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
HDAC11Q96DB2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HDAC11Q96DB2 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.05■□□□□ 0.8
HDAC11Q96DB2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.05■□□□□ 0.8
HDAC11Q96DB2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDAC11Q96DB2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.05■□□□□ 0.8
HDAC11Q96DB2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.05■□□□□ 0.8
HDAC11Q96DB2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HDAC11Q96DB2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
HDAC11Q96DB2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.05■□□□□ 0.8
HDAC11Q96DB2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.05■□□□□ 0.8
HDAC11Q96DB2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDAC11Q96DB2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDAC11Q96DB2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.04■□□□□ 0.8
HDAC11Q96DB2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.03■□□□□ 0.8
HDAC11Q96DB2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.03■□□□□ 0.8
HDAC11Q96DB2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HDAC11Q96DB2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.03■□□□□ 0.8
HDAC11Q96DB2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HDAC11Q96DB2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.03■□□□□ 0.8
HDAC11Q96DB2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.03■□□□□ 0.8
HDAC11Q96DB2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDAC11Q96DB2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.03■□□□□ 0.8
HDAC11Q96DB2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDAC11Q96DB2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDAC11Q96DB2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.03■□□□□ 0.8
HDAC11Q96DB2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HDAC11Q96DB2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HDAC11Q96DB2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HDAC11Q96DB2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.03■□□□□ 0.8
HDAC11Q96DB2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms