Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF34Q969K3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF34Q969K3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF34Q969K3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF34Q969K3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF34Q969K3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.42■□□□□ 0.86
RNF34Q969K3 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.42■□□□□ 0.86
RNF34Q969K3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF34Q969K3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF34Q969K3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RNF34Q969K3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RNF34Q969K3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF34Q969K3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF34Q969K3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF34Q969K3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF34Q969K3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF34Q969K3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.41■□□□□ 0.86
RNF34Q969K3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF34Q969K3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.41■□□□□ 0.86
RNF34Q969K3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.41■□□□□ 0.86
RNF34Q969K3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RNF34Q969K3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.41■□□□□ 0.86
RNF34Q969K3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF34Q969K3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RNF34Q969K3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF34Q969K3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RNF34Q969K3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF34Q969K3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.41■□□□□ 0.86
RNF34Q969K3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF34Q969K3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF34Q969K3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.4■□□□□ 0.86
RNF34Q969K3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF34Q969K3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RNF34Q969K3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RNF34Q969K3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.4■□□□□ 0.86
RNF34Q969K3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF34Q969K3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF34Q969K3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
RNF34Q969K3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.4■□□□□ 0.86
RNF34Q969K3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RNF34Q969K3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RNF34Q969K3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
RNF34Q969K3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF34Q969K3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
RNF34Q969K3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.4■□□□□ 0.86
RNF34Q969K3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
RNF34Q969K3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.4■□□□□ 0.86
RNF34Q969K3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.4■□□□□ 0.86
RNF34Q969K3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.4■□□□□ 0.86
RNF34Q969K3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.4■□□□□ 0.86
RNF34Q969K3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF34Q969K3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF34Q969K3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
RNF34Q969K3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
RNF34Q969K3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RNF34Q969K3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.39■□□□□ 0.86
RNF34Q969K3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RNF34Q969K3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.39■□□□□ 0.85
RNF34Q969K3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF34Q969K3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RNF34Q969K3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF34Q969K3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.39■□□□□ 0.85
RNF34Q969K3 TUBB8P6-201ENST00000436895 1288 ntBASIC20.39■□□□□ 0.85
RNF34Q969K3 UBE2SP1-201ENST00000450587 669 ntBASIC20.39■□□□□ 0.85
RNF34Q969K3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF34Q969K3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.39■□□□□ 0.85
RNF34Q969K3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.39■□□□□ 0.85
RNF34Q969K3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.39■□□□□ 0.85
RNF34Q969K3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
RNF34Q969K3 AP006294.2-201ENST00000641667 209 ntBASIC20.39■□□□□ 0.85
RNF34Q969K3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.39■□□□□ 0.85
RNF34Q969K3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF34Q969K3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RNF34Q969K3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF34Q969K3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF34Q969K3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF34Q969K3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RNF34Q969K3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF34Q969K3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RNF34Q969K3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF34Q969K3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RNF34Q969K3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF34Q969K3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF34Q969K3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
RNF34Q969K3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF34Q969K3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF34Q969K3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RNF34Q969K3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RNF34Q969K3 KRT16P5-201ENST00000455284 522 ntBASIC20.38■□□□□ 0.85
RNF34Q969K3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF34Q969K3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF34Q969K3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
RNF34Q969K3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF34Q969K3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.38■□□□□ 0.85
RNF34Q969K3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF34Q969K3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF34Q969K3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF34Q969K3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF34Q969K3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
RNF34Q969K3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms