Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCAMP4Q969E2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCAMP4Q969E2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCAMP4Q969E2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
SCAMP4Q969E2 NIFKP9-201ENST00000419265 221 ntBASIC19.41■□□□□ 0.7
SCAMP4Q969E2 FAM197Y1-201ENST00000421178 764 ntBASIC19.41■□□□□ 0.7
SCAMP4Q969E2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.41■□□□□ 0.7
SCAMP4Q969E2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCAMP4Q969E2 MIR4497-201ENST00000583208 89 ntBASIC19.41■□□□□ 0.7
SCAMP4Q969E2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.41■□□□□ 0.7
SCAMP4Q969E2 AC073195.1-201ENST00000607241 877 ntBASIC19.41■□□□□ 0.7
SCAMP4Q969E2 AP001412.1-201ENST00000608405 714 ntBASIC19.41■□□□□ 0.7
SCAMP4Q969E2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCAMP4Q969E2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCAMP4Q969E2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCAMP4Q969E2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCAMP4Q969E2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCAMP4Q969E2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.4■□□□□ 0.7
SCAMP4Q969E2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCAMP4Q969E2 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.4■□□□□ 0.7
SCAMP4Q969E2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.4■□□□□ 0.7
SCAMP4Q969E2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.4■□□□□ 0.7
SCAMP4Q969E2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SCAMP4Q969E2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.4■□□□□ 0.7
SCAMP4Q969E2 CD177P1-201ENST00000606252 935 ntBASIC19.4■□□□□ 0.7
SCAMP4Q969E2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SCAMP4Q969E2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCAMP4Q969E2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SCAMP4Q969E2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SCAMP4Q969E2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCAMP4Q969E2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.4■□□□□ 0.7
SCAMP4Q969E2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCAMP4Q969E2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SCAMP4Q969E2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SCAMP4Q969E2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.39■□□□□ 0.7
SCAMP4Q969E2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SCAMP4Q969E2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SCAMP4Q969E2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCAMP4Q969E2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCAMP4Q969E2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCAMP4Q969E2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.38■□□□□ 0.69
SCAMP4Q969E2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCAMP4Q969E2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCAMP4Q969E2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.38■□□□□ 0.69
SCAMP4Q969E2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SCAMP4Q969E2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCAMP4Q969E2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SCAMP4Q969E2 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.38■□□□□ 0.69
SCAMP4Q969E2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SCAMP4Q969E2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCAMP4Q969E2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.38■□□□□ 0.69
SCAMP4Q969E2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
SCAMP4Q969E2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCAMP4Q969E2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.38■□□□□ 0.69
SCAMP4Q969E2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.38■□□□□ 0.69
SCAMP4Q969E2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.38■□□□□ 0.69
SCAMP4Q969E2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.38■□□□□ 0.69
SCAMP4Q969E2 CR392000.1-201ENST00000624770 1228 ntBASIC19.38■□□□□ 0.69
SCAMP4Q969E2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.38■□□□□ 0.69
SCAMP4Q969E2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCAMP4Q969E2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCAMP4Q969E2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCAMP4Q969E2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCAMP4Q969E2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SCAMP4Q969E2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCAMP4Q969E2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
SCAMP4Q969E2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SCAMP4Q969E2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCAMP4Q969E2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCAMP4Q969E2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCAMP4Q969E2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCAMP4Q969E2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCAMP4Q969E2 KSR1P1-201ENST00000446298 240 ntBASIC19.37■□□□□ 0.69
SCAMP4Q969E2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.37■□□□□ 0.69
SCAMP4Q969E2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCAMP4Q969E2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms