Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 CYP2T1P-201ENST00000432607 1285 ntBASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 ZNF815P-204ENST00000434898 1737 ntBASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.07■□□□□ 0.32
RPS4Y2Q8TD47 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 TFP1-202ENST00000475455 1573 ntBASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 AC004911.1-201ENST00000416316 871 ntBASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPS4Y2Q8TD47 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 AC079598.2-202ENST00000546624 1451 ntBASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 AC005082.1-201ENST00000413042 2259 ntBASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 AC069236.1-201ENST00000604339 616 ntBASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 AC092437.1-201ENST00000624794 1048 ntBASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.05■□□□□ 0.32
RPS4Y2Q8TD47 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPS4Y2Q8TD47 AC010980.2-201ENST00000587099 1412 ntBASIC17.04■□□□□ 0.32
RPS4Y2Q8TD47 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RPS4Y2Q8TD47 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.04■□□□□ 0.32
RPS4Y2Q8TD47 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPS4Y2Q8TD47 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPS4Y2Q8TD47 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
RPS4Y2Q8TD47 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RPS4Y2Q8TD47 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RPS4Y2Q8TD47 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.04■□□□□ 0.32
RPS4Y2Q8TD47 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms