Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 AP001271.2-201ENST00000624018 1556 ntBASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 AL353807.1-201ENST00000427475 662 ntBASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 AC113410.3-201ENST00000623366 203 ntBASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FNDC9Q8TBE3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 TSPY7P-201ENST00000431358 1114 ntBASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FNDC9Q8TBE3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.53■□□□□ 0.4
FNDC9Q8TBE3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FNDC9Q8TBE3 AC112907.3-201ENST00000577781 2400 ntBASIC17.53■□□□□ 0.4
FNDC9Q8TBE3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FNDC9Q8TBE3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FNDC9Q8TBE3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.53■□□□□ 0.4
FNDC9Q8TBE3 AIRN-201ENST00000601203 4374 ntBASIC17.53■□□□□ 0.4
FNDC9Q8TBE3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FNDC9Q8TBE3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FNDC9Q8TBE3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.53■□□□□ 0.4
FNDC9Q8TBE3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.53■□□□□ 0.4
FNDC9Q8TBE3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FNDC9Q8TBE3 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.53■□□□□ 0.4
FNDC9Q8TBE3 AP002982.1-201ENST00000492365 877 ntBASIC17.53■□□□□ 0.4
FNDC9Q8TBE3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.53■□□□□ 0.4
FNDC9Q8TBE3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.53■□□□□ 0.4
FNDC9Q8TBE3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FNDC9Q8TBE3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.53■□□□□ 0.4
FNDC9Q8TBE3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
FNDC9Q8TBE3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FNDC9Q8TBE3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FNDC9Q8TBE3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
FNDC9Q8TBE3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.52■□□□□ 0.4
FNDC9Q8TBE3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FNDC9Q8TBE3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FNDC9Q8TBE3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
FNDC9Q8TBE3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FNDC9Q8TBE3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
FNDC9Q8TBE3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
FNDC9Q8TBE3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
FNDC9Q8TBE3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FNDC9Q8TBE3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.4
FNDC9Q8TBE3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FNDC9Q8TBE3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.4
FNDC9Q8TBE3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.52■□□□□ 0.4
FNDC9Q8TBE3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.4
FNDC9Q8TBE3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
FNDC9Q8TBE3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FNDC9Q8TBE3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
FNDC9Q8TBE3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FNDC9Q8TBE3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FNDC9Q8TBE3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FNDC9Q8TBE3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms