Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SMARCC2Q8TAQ2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC22.85■■□□□ 1.25
SMARCC2Q8TAQ2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC22.85■■□□□ 1.25
SMARCC2Q8TAQ2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SMARCC2Q8TAQ2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SMARCC2Q8TAQ2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
SMARCC2Q8TAQ2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SMARCC2Q8TAQ2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC22.85■■□□□ 1.25
SMARCC2Q8TAQ2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.85■■□□□ 1.25
SMARCC2Q8TAQ2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
SMARCC2Q8TAQ2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SMARCC2Q8TAQ2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
SMARCC2Q8TAQ2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SMARCC2Q8TAQ2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
SMARCC2Q8TAQ2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SMARCC2Q8TAQ2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SMARCC2Q8TAQ2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC22.84■■□□□ 1.25
SMARCC2Q8TAQ2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SMARCC2Q8TAQ2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SMARCC2Q8TAQ2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.84■■□□□ 1.25
SMARCC2Q8TAQ2 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.84■■□□□ 1.25
SMARCC2Q8TAQ2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SMARCC2Q8TAQ2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC22.84■■□□□ 1.25
SMARCC2Q8TAQ2 AL023875.1-201ENST00000640777 796 ntBASIC22.84■■□□□ 1.25
SMARCC2Q8TAQ2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SMARCC2Q8TAQ2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SMARCC2Q8TAQ2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC22.84■■□□□ 1.25
SMARCC2Q8TAQ2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SMARCC2Q8TAQ2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SMARCC2Q8TAQ2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.84■■□□□ 1.25
SMARCC2Q8TAQ2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC22.84■■□□□ 1.25
SMARCC2Q8TAQ2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SMARCC2Q8TAQ2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
SMARCC2Q8TAQ2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.83■■□□□ 1.25
SMARCC2Q8TAQ2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SMARCC2Q8TAQ2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SMARCC2Q8TAQ2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC22.83■■□□□ 1.25
SMARCC2Q8TAQ2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SMARCC2Q8TAQ2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SMARCC2Q8TAQ2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SMARCC2Q8TAQ2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SMARCC2Q8TAQ2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC22.83■■□□□ 1.25
SMARCC2Q8TAQ2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SMARCC2Q8TAQ2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SMARCC2Q8TAQ2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SMARCC2Q8TAQ2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.83■■□□□ 1.25
SMARCC2Q8TAQ2 PRKY-204ENST00000533551 1019 ntBASIC22.83■■□□□ 1.25
SMARCC2Q8TAQ2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.83■■□□□ 1.25
SMARCC2Q8TAQ2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
SMARCC2Q8TAQ2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.83■■□□□ 1.25
SMARCC2Q8TAQ2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
SMARCC2Q8TAQ2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
SMARCC2Q8TAQ2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
SMARCC2Q8TAQ2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.83■■□□□ 1.24
SMARCC2Q8TAQ2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 AC018445.3-201ENST00000624177 1945 ntBASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 AL032819.2-201ENST00000624543 2162 ntBASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 AC239809.2-201ENST00000415381 517 ntBASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.82■■□□□ 1.24
SMARCC2Q8TAQ2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
SMARCC2Q8TAQ2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.81■■□□□ 1.24
SMARCC2Q8TAQ2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SMARCC2Q8TAQ2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
SMARCC2Q8TAQ2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC22.81■■□□□ 1.24
SMARCC2Q8TAQ2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.81■■□□□ 1.24
SMARCC2Q8TAQ2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SMARCC2Q8TAQ2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.81■■□□□ 1.24
SMARCC2Q8TAQ2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.81■■□□□ 1.24
SMARCC2Q8TAQ2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.81■■□□□ 1.24
SMARCC2Q8TAQ2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.81■■□□□ 1.24
SMARCC2Q8TAQ2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.81■■□□□ 1.24
SMARCC2Q8TAQ2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC22.81■■□□□ 1.24
SMARCC2Q8TAQ2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.81■■□□□ 1.24
SMARCC2Q8TAQ2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SMARCC2Q8TAQ2 AL121829.2-201ENST00000620908 328 ntBASIC22.81■■□□□ 1.24
SMARCC2Q8TAQ2 AP006294.2-201ENST00000641667 209 ntBASIC22.81■■□□□ 1.24
SMARCC2Q8TAQ2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SMARCC2Q8TAQ2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms