Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CCDC168Q8NDH2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC168Q8NDH2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.33■□□□□ 0.21
CCDC168Q8NDH2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.33■□□□□ 0.21
CCDC168Q8NDH2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC168Q8NDH2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC168Q8NDH2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC168Q8NDH2 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC168Q8NDH2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC168Q8NDH2 KRT16P4-201ENST00000453883 522 ntBASIC16.33■□□□□ 0.2
CCDC168Q8NDH2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC168Q8NDH2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC168Q8NDH2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC168Q8NDH2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC168Q8NDH2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC168Q8NDH2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC168Q8NDH2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC168Q8NDH2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC168Q8NDH2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC168Q8NDH2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC168Q8NDH2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC168Q8NDH2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC168Q8NDH2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC168Q8NDH2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC168Q8NDH2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC168Q8NDH2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC168Q8NDH2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CCDC168Q8NDH2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC168Q8NDH2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC168Q8NDH2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CCDC168Q8NDH2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC168Q8NDH2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC168Q8NDH2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC168Q8NDH2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC168Q8NDH2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC168Q8NDH2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC168Q8NDH2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC168Q8NDH2 CHCHD2P8-201ENST00000429873 447 ntBASIC16.32■□□□□ 0.2
CCDC168Q8NDH2 NUS1P1-201ENST00000446295 882 ntBASIC16.32■□□□□ 0.2
CCDC168Q8NDH2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC168Q8NDH2 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC168Q8NDH2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC168Q8NDH2 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC168Q8NDH2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC168Q8NDH2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC168Q8NDH2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
CCDC168Q8NDH2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC168Q8NDH2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC168Q8NDH2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC168Q8NDH2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC168Q8NDH2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CCDC168Q8NDH2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
CCDC168Q8NDH2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC168Q8NDH2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC168Q8NDH2 KRT18P58-201ENST00000527480 1120 ntBASIC16.31■□□□□ 0.2
CCDC168Q8NDH2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC168Q8NDH2 AC092865.5-201ENST00000545435 363 ntBASIC16.31■□□□□ 0.2
CCDC168Q8NDH2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC168Q8NDH2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CCDC168Q8NDH2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC168Q8NDH2 KRT8P17-201ENST00000453110 1448 ntBASIC16.31■□□□□ 0.2
CCDC168Q8NDH2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC168Q8NDH2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.31■□□□□ 0.2
CCDC168Q8NDH2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
CCDC168Q8NDH2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC168Q8NDH2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC168Q8NDH2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC168Q8NDH2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC168Q8NDH2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC168Q8NDH2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CCDC168Q8NDH2 TUBB8P6-201ENST00000436895 1288 ntBASIC16.3■□□□□ 0.2
CCDC168Q8NDH2 AC012615.1-201ENST00000565797 1299 ntBASIC16.3■□□□□ 0.2
CCDC168Q8NDH2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC168Q8NDH2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.3■□□□□ 0.2
CCDC168Q8NDH2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC168Q8NDH2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC168Q8NDH2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC168Q8NDH2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC168Q8NDH2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC168Q8NDH2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC168Q8NDH2 RNA5SP419-201ENST00000515908 135 ntBASIC16.3■□□□□ 0.2
CCDC168Q8NDH2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.3■□□□□ 0.2
CCDC168Q8NDH2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC168Q8NDH2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CCDC168Q8NDH2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC168Q8NDH2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC168Q8NDH2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC168Q8NDH2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC168Q8NDH2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC168Q8NDH2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC168Q8NDH2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC168Q8NDH2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC168Q8NDH2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
CCDC168Q8NDH2 SLC25A1P1-201ENST00000528351 927 ntBASIC16.29■□□□□ 0.2
CCDC168Q8NDH2 AC091304.2-201ENST00000564639 760 ntBASIC16.29■□□□□ 0.2
CCDC168Q8NDH2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC168Q8NDH2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.29■□□□□ 0.2
CCDC168Q8NDH2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC168Q8NDH2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC168Q8NDH2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms