Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC63Q8NA47 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CCDC63Q8NA47 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC63Q8NA47 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CCDC63Q8NA47 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC63Q8NA47 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CCDC63Q8NA47 KRT18P14-201ENST00000534205 1250 ntBASIC19.76■□□□□ 0.75
CCDC63Q8NA47 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.76■□□□□ 0.75
CCDC63Q8NA47 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC63Q8NA47 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC63Q8NA47 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC63Q8NA47 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC63Q8NA47 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
CCDC63Q8NA47 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC63Q8NA47 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC63Q8NA47 AC087633.2-202ENST00000565166 1439 ntBASIC19.76■□□□□ 0.75
CCDC63Q8NA47 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC63Q8NA47 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC63Q8NA47 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC63Q8NA47 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC63Q8NA47 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC63Q8NA47 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
CCDC63Q8NA47 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC63Q8NA47 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC63Q8NA47 AC018470.1-201ENST00000624790 3129 ntBASIC19.75■□□□□ 0.75
CCDC63Q8NA47 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC63Q8NA47 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC63Q8NA47 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC63Q8NA47 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC63Q8NA47 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC63Q8NA47 YBX1P1-201ENST00000445822 960 ntBASIC19.75■□□□□ 0.75
CCDC63Q8NA47 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC63Q8NA47 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC63Q8NA47 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CCDC63Q8NA47 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CCDC63Q8NA47 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC63Q8NA47 AL032819.2-201ENST00000624543 2162 ntBASIC19.75■□□□□ 0.75
CCDC63Q8NA47 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC63Q8NA47 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC63Q8NA47 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC63Q8NA47 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC63Q8NA47 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC63Q8NA47 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC63Q8NA47 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC63Q8NA47 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC63Q8NA47 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC63Q8NA47 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC63Q8NA47 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC63Q8NA47 PKD1P1-201ENST00000458669 6805 ntBASIC19.74■□□□□ 0.75
CCDC63Q8NA47 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
CCDC63Q8NA47 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC63Q8NA47 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC63Q8NA47 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC63Q8NA47 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.74■□□□□ 0.75
CCDC63Q8NA47 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC63Q8NA47 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC63Q8NA47 PCDHB18P-201ENST00000524813 2368 ntBASIC19.74■□□□□ 0.75
CCDC63Q8NA47 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC63Q8NA47 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC63Q8NA47 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC63Q8NA47 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC63Q8NA47 LINC01465-201ENST00000408887 1940 ntBASIC19.74■□□□□ 0.75
CCDC63Q8NA47 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CCDC63Q8NA47 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC63Q8NA47 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC63Q8NA47 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 KRT19P1-201ENST00000405746 1186 ntBASIC19.73■□□□□ 0.75
CCDC63Q8NA47 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 UBE2DNL-204ENST00000602536 740 ntBASIC19.73■□□□□ 0.75
CCDC63Q8NA47 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC63Q8NA47 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC63Q8NA47 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC63Q8NA47 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CCDC63Q8NA47 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC63Q8NA47 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms