Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCNYL1Q8N7R7 LINC01465-201ENST00000408887 1940 ntBASIC19.24■□□□□ 0.67
CCNYL1Q8N7R7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCNYL1Q8N7R7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.24■□□□□ 0.67
CCNYL1Q8N7R7 AC093787.1-201ENST00000450396 207 ntBASIC19.24■□□□□ 0.67
CCNYL1Q8N7R7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.24■□□□□ 0.67
CCNYL1Q8N7R7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCNYL1Q8N7R7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
CCNYL1Q8N7R7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.24■□□□□ 0.67
CCNYL1Q8N7R7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCNYL1Q8N7R7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCNYL1Q8N7R7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCNYL1Q8N7R7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCNYL1Q8N7R7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
CCNYL1Q8N7R7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCNYL1Q8N7R7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCNYL1Q8N7R7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCNYL1Q8N7R7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.23■□□□□ 0.67
CCNYL1Q8N7R7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCNYL1Q8N7R7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCNYL1Q8N7R7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCNYL1Q8N7R7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCNYL1Q8N7R7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCNYL1Q8N7R7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.23■□□□□ 0.67
CCNYL1Q8N7R7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCNYL1Q8N7R7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCNYL1Q8N7R7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.23■□□□□ 0.67
CCNYL1Q8N7R7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.23■□□□□ 0.67
CCNYL1Q8N7R7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCNYL1Q8N7R7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCNYL1Q8N7R7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCNYL1Q8N7R7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCNYL1Q8N7R7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CCNYL1Q8N7R7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCNYL1Q8N7R7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCNYL1Q8N7R7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCNYL1Q8N7R7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.23■□□□□ 0.67
CCNYL1Q8N7R7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.23■□□□□ 0.67
CCNYL1Q8N7R7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CCNYL1Q8N7R7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.22■□□□□ 0.67
CCNYL1Q8N7R7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 AC018553.1-201ENST00000616682 1458 ntBASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CCNYL1Q8N7R7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms