Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 TREX1-205ENST00000625293 1783 ntBASIC19.32■□□□□ 0.68
TRAM1L1Q8N609 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAM1L1Q8N609 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAM1L1Q8N609 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAM1L1Q8N609 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAM1L1Q8N609 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAM1L1Q8N609 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.32■□□□□ 0.68
TRAM1L1Q8N609 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TRAM1L1Q8N609 HLA-A-209ENST00000638375 975 ntBASIC19.32■□□□□ 0.68
TRAM1L1Q8N609 AL049637.2-201ENST00000641778 930 ntBASIC19.32■□□□□ 0.68
TRAM1L1Q8N609 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.32■□□□□ 0.68
TRAM1L1Q8N609 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAM1L1Q8N609 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.32■□□□□ 0.68
TRAM1L1Q8N609 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAM1L1Q8N609 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAM1L1Q8N609 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.32■□□□□ 0.68
TRAM1L1Q8N609 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAM1L1Q8N609 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 KSR1P1-201ENST00000446298 240 ntBASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 AL445675.2-201ENST00000620291 557 ntBASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAM1L1Q8N609 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 AC113410.3-201ENST00000623366 203 ntBASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAM1L1Q8N609 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAM1L1Q8N609 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAM1L1Q8N609 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAM1L1Q8N609 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAM1L1Q8N609 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAM1L1Q8N609 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TRAM1L1Q8N609 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAM1L1Q8N609 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRAM1L1Q8N609 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.29■□□□□ 0.68
TRAM1L1Q8N609 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.29■□□□□ 0.68
TRAM1L1Q8N609 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.29■□□□□ 0.68
TRAM1L1Q8N609 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.29■□□□□ 0.68
TRAM1L1Q8N609 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.29■□□□□ 0.68
TRAM1L1Q8N609 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.29■□□□□ 0.68
TRAM1L1Q8N609 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TRAM1L1Q8N609 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
TRAM1L1Q8N609 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAM1L1Q8N609 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.28■□□□□ 0.68
TRAM1L1Q8N609 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAM1L1Q8N609 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAM1L1Q8N609 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TRAM1L1Q8N609 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAM1L1Q8N609 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAM1L1Q8N609 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAM1L1Q8N609 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.28■□□□□ 0.68
TRAM1L1Q8N609 KRT16P1-201ENST00000399124 1418 ntBASIC19.28■□□□□ 0.68
TRAM1L1Q8N609 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAM1L1Q8N609 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAM1L1Q8N609 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms