Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS52Q8N1B4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VPS52Q8N1B4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VPS52Q8N1B4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.13■□□□□ 0.97
VPS52Q8N1B4 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.13■□□□□ 0.97
VPS52Q8N1B4 AC010947.1-201ENST00000623454 693 ntBASIC21.13■□□□□ 0.97
VPS52Q8N1B4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS52Q8N1B4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.13■□□□□ 0.97
VPS52Q8N1B4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS52Q8N1B4 AC073314.1-201ENST00000568729 2216 ntBASIC21.13■□□□□ 0.97
VPS52Q8N1B4 GABARAPL3-202ENST00000624044 1851 ntBASIC21.13■□□□□ 0.97
VPS52Q8N1B4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
VPS52Q8N1B4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS52Q8N1B4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
VPS52Q8N1B4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.13■□□□□ 0.97
VPS52Q8N1B4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.13■□□□□ 0.97
VPS52Q8N1B4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS52Q8N1B4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS52Q8N1B4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.12■□□□□ 0.97
VPS52Q8N1B4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS52Q8N1B4 KRT18P22-201ENST00000402024 1347 ntBASIC21.12■□□□□ 0.97
VPS52Q8N1B4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS52Q8N1B4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
VPS52Q8N1B4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS52Q8N1B4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS52Q8N1B4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS52Q8N1B4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.12■□□□□ 0.97
VPS52Q8N1B4 AC113347.1-201ENST00000413321 391 ntBASIC21.12■□□□□ 0.97
VPS52Q8N1B4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VPS52Q8N1B4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.12■□□□□ 0.97
VPS52Q8N1B4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VPS52Q8N1B4 AL590326.2-201ENST00000625139 305 ntBASIC21.12■□□□□ 0.97
VPS52Q8N1B4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
VPS52Q8N1B4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
VPS52Q8N1B4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS52Q8N1B4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
VPS52Q8N1B4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS52Q8N1B4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
VPS52Q8N1B4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS52Q8N1B4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS52Q8N1B4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS52Q8N1B4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
VPS52Q8N1B4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
VPS52Q8N1B4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.11■□□□□ 0.97
VPS52Q8N1B4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.11■□□□□ 0.97
VPS52Q8N1B4 AL031985.4-201ENST00000642138 673 ntBASIC21.11■□□□□ 0.97
VPS52Q8N1B4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.11■□□□□ 0.97
VPS52Q8N1B4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
VPS52Q8N1B4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS52Q8N1B4 DPP3P2-201ENST00000416030 1696 ntBASIC21.11■□□□□ 0.97
VPS52Q8N1B4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS52Q8N1B4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS52Q8N1B4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS52Q8N1B4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
VPS52Q8N1B4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VPS52Q8N1B4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS52Q8N1B4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
VPS52Q8N1B4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
VPS52Q8N1B4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VPS52Q8N1B4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VPS52Q8N1B4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS52Q8N1B4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.1■□□□□ 0.97
VPS52Q8N1B4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS52Q8N1B4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.1■□□□□ 0.97
VPS52Q8N1B4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VPS52Q8N1B4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS52Q8N1B4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VPS52Q8N1B4 KRT18P57-201ENST00000443599 1254 ntBASIC21.1■□□□□ 0.97
VPS52Q8N1B4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.1■□□□□ 0.97
VPS52Q8N1B4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.1■□□□□ 0.97
VPS52Q8N1B4 C1QL1P1-201ENST00000568105 661 ntBASIC21.1■□□□□ 0.97
VPS52Q8N1B4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS52Q8N1B4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS52Q8N1B4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS52Q8N1B4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS52Q8N1B4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS52Q8N1B4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS52Q8N1B4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.09■□□□□ 0.97
VPS52Q8N1B4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS52Q8N1B4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS52Q8N1B4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
VPS52Q8N1B4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS52Q8N1B4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
VPS52Q8N1B4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS52Q8N1B4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.09■□□□□ 0.97
VPS52Q8N1B4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.09■□□□□ 0.97
VPS52Q8N1B4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.09■□□□□ 0.97
VPS52Q8N1B4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.09■□□□□ 0.97
VPS52Q8N1B4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.09■□□□□ 0.97
VPS52Q8N1B4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.09■□□□□ 0.97
VPS52Q8N1B4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS52Q8N1B4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.09■□□□□ 0.97
VPS52Q8N1B4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
VPS52Q8N1B4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
VPS52Q8N1B4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
VPS52Q8N1B4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
VPS52Q8N1B4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
VPS52Q8N1B4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VPS52Q8N1B4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.08■□□□□ 0.97
VPS52Q8N1B4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms