Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC116Q8IYX3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC116Q8IYX3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC116Q8IYX3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC116Q8IYX3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC116Q8IYX3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC116Q8IYX3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC116Q8IYX3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC116Q8IYX3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC116Q8IYX3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC116Q8IYX3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC116Q8IYX3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC116Q8IYX3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC116Q8IYX3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC116Q8IYX3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC116Q8IYX3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 KRT17P3-201ENST00000420566 1262 ntBASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CCDC116Q8IYX3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC116Q8IYX3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC116Q8IYX3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC116Q8IYX3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC116Q8IYX3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC116Q8IYX3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CCDC116Q8IYX3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC116Q8IYX3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC116Q8IYX3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC116Q8IYX3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC116Q8IYX3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC116Q8IYX3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC116Q8IYX3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC116Q8IYX3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC116Q8IYX3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
CCDC116Q8IYX3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CCDC116Q8IYX3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC116Q8IYX3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC116Q8IYX3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC116Q8IYX3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 ESRRAP1-201ENST00000400596 1257 ntBASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 YBX1P10-201ENST00000444752 975 ntBASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 CD99P1-205ENST00000527459 561 ntBASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 AC005332.7-201ENST00000614046 2005 ntBASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC116Q8IYX3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
CCDC116Q8IYX3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC116Q8IYX3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
CCDC116Q8IYX3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC116Q8IYX3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC116Q8IYX3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC116Q8IYX3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC116Q8IYX3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CCDC116Q8IYX3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC116Q8IYX3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms