Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM48Q8IWZ4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 FAM197Y1-201ENST00000421178 764 ntBASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 AL355355.2-201ENST00000442321 338 ntBASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 CD177P1-201ENST00000606252 935 ntBASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM48Q8IWZ4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 AC007952.6-201ENST00000573168 2673 ntBASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 AC003957.1-201ENST00000625108 2673 ntBASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM48Q8IWZ4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 KRT18P16-201ENST00000510337 1294 ntBASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 AL353708.3-201ENST00000610272 989 ntBASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms