Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.59■□□□□ 0.89
SCN4BQ8IWT1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCN4BQ8IWT1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SCN4BQ8IWT1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCN4BQ8IWT1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCN4BQ8IWT1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
SCN4BQ8IWT1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCN4BQ8IWT1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCN4BQ8IWT1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SCN4BQ8IWT1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCN4BQ8IWT1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SCN4BQ8IWT1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.58■□□□□ 0.89
SCN4BQ8IWT1 AC087499.1-201ENST00000418141 1075 ntBASIC20.58■□□□□ 0.89
SCN4BQ8IWT1 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.58■□□□□ 0.89
SCN4BQ8IWT1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.58■□□□□ 0.89
SCN4BQ8IWT1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SCN4BQ8IWT1 AC131212.4-201ENST00000623606 975 ntBASIC20.58■□□□□ 0.89
SCN4BQ8IWT1 HLA-A-209ENST00000638375 975 ntBASIC20.58■□□□□ 0.89
SCN4BQ8IWT1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.58■□□□□ 0.88
SCN4BQ8IWT1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCN4BQ8IWT1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SCN4BQ8IWT1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCN4BQ8IWT1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCN4BQ8IWT1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCN4BQ8IWT1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
SCN4BQ8IWT1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SCN4BQ8IWT1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCN4BQ8IWT1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 TCF3P1-201ENST00000423021 1937 ntBASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 UNC93B2-201ENST00000285383 730 ntBASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 AP000525.1-201ENST00000608286 694 ntBASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 AC133561.5-201ENST00000635547 218 ntBASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
SCN4BQ8IWT1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 AC079598.2-202ENST00000546624 1451 ntBASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 MMP23A-201ENST00000234610 1017 ntBASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 AC004980.1-204ENST00000429707 299 ntBASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 AC116562.2-201ENST00000507042 360 ntBASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN4BQ8IWT1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 LINC01521-201ENST00000504184 1943 ntBASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 MIR1238-201ENST00000408483 83 ntBASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.55■□□□□ 0.88
SCN4BQ8IWT1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms