Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.25■□□□□ 0.35
LINC00346Q8IVM7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00346Q8IVM7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.25■□□□□ 0.35
LINC00346Q8IVM7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LINC00346Q8IVM7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
LINC00346Q8IVM7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
LINC00346Q8IVM7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.25■□□□□ 0.35
LINC00346Q8IVM7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 AC083880.1-201ENST00000608266 535 ntBASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00346Q8IVM7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 AC090192.1-201ENST00000517740 490 ntBASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00346Q8IVM7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 PNMA6B-201ENST00000538162 1200 ntBASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 HLA-B-256ENST00000639848 1089 ntBASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.22■□□□□ 0.35
LINC00346Q8IVM7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms