Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VRK2Q86Y07 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.03■□□□□ 0.48
VRK2Q86Y07 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VRK2Q86Y07 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VRK2Q86Y07 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
VRK2Q86Y07 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VRK2Q86Y07 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VRK2Q86Y07 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VRK2Q86Y07 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
VRK2Q86Y07 AC060766.5-201ENST00000590539 871 ntBASIC18.03■□□□□ 0.48
VRK2Q86Y07 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VRK2Q86Y07 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VRK2Q86Y07 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VRK2Q86Y07 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.03■□□□□ 0.48
VRK2Q86Y07 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.03■□□□□ 0.48
VRK2Q86Y07 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VRK2Q86Y07 AIRN-201ENST00000601203 4374 ntBASIC18.02■□□□□ 0.48
VRK2Q86Y07 AC120498.9-201ENST00000339021 3867 ntBASIC18.02■□□□□ 0.48
VRK2Q86Y07 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
VRK2Q86Y07 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
VRK2Q86Y07 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
VRK2Q86Y07 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.02■□□□□ 0.48
VRK2Q86Y07 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VRK2Q86Y07 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
VRK2Q86Y07 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VRK2Q86Y07 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
VRK2Q86Y07 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
VRK2Q86Y07 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
VRK2Q86Y07 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VRK2Q86Y07 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.02■□□□□ 0.48
VRK2Q86Y07 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.02■□□□□ 0.48
VRK2Q86Y07 AC090192.1-201ENST00000517740 490 ntBASIC18.02■□□□□ 0.48
VRK2Q86Y07 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.02■□□□□ 0.48
VRK2Q86Y07 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.02■□□□□ 0.48
VRK2Q86Y07 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
VRK2Q86Y07 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VRK2Q86Y07 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
VRK2Q86Y07 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.01■□□□□ 0.47
VRK2Q86Y07 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
VRK2Q86Y07 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
VRK2Q86Y07 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VRK2Q86Y07 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VRK2Q86Y07 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VRK2Q86Y07 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VRK2Q86Y07 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VRK2Q86Y07 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.01■□□□□ 0.47
VRK2Q86Y07 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
VRK2Q86Y07 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
VRK2Q86Y07 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.01■□□□□ 0.47
VRK2Q86Y07 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.01■□□□□ 0.47
VRK2Q86Y07 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.01■□□□□ 0.47
VRK2Q86Y07 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.01■□□□□ 0.47
VRK2Q86Y07 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.01■□□□□ 0.47
VRK2Q86Y07 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.01■□□□□ 0.47
VRK2Q86Y07 AC104771.1-201ENST00000603335 964 ntBASIC18.01■□□□□ 0.47
VRK2Q86Y07 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VRK2Q86Y07 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
VRK2Q86Y07 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VRK2Q86Y07 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VRK2Q86Y07 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VRK2Q86Y07 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VRK2Q86Y07 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VRK2Q86Y07 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18■□□□□ 0.47
VRK2Q86Y07 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VRK2Q86Y07 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
VRK2Q86Y07 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18■□□□□ 0.47
VRK2Q86Y07 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VRK2Q86Y07 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VRK2Q86Y07 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
VRK2Q86Y07 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VRK2Q86Y07 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18■□□□□ 0.47
VRK2Q86Y07 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18■□□□□ 0.47
VRK2Q86Y07 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
VRK2Q86Y07 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VRK2Q86Y07 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
VRK2Q86Y07 AC069152.1-201ENST00000438030 544 ntBASIC18■□□□□ 0.47
VRK2Q86Y07 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18■□□□□ 0.47
VRK2Q86Y07 OR2A1-AS1-207ENST00000486094 819 ntBASIC18■□□□□ 0.47
VRK2Q86Y07 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18■□□□□ 0.47
VRK2Q86Y07 AC133041.1-202ENST00000642053 222 ntBASIC18■□□□□ 0.47
VRK2Q86Y07 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VRK2Q86Y07 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18■□□□□ 0.47
VRK2Q86Y07 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
VRK2Q86Y07 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VRK2Q86Y07 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18■□□□□ 0.47
VRK2Q86Y07 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VRK2Q86Y07 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VRK2Q86Y07 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VRK2Q86Y07 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VRK2Q86Y07 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
VRK2Q86Y07 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
VRK2Q86Y07 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.99■□□□□ 0.47
VRK2Q86Y07 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.99■□□□□ 0.47
VRK2Q86Y07 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VRK2Q86Y07 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
VRK2Q86Y07 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
VRK2Q86Y07 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VRK2Q86Y07 TNXA-203ENST00000507684 2038 ntBASIC17.99■□□□□ 0.47
VRK2Q86Y07 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VRK2Q86Y07 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms