Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 AL391422.3-201ENST00000603791 2761 ntBASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC12.09□□□□□ -0.47
VPS13BQ7Z7G8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
VPS13BQ7Z7G8 GXYLT1P6-201ENST00000456472 1187 ntBASIC12.08□□□□□ -0.47
VPS13BQ7Z7G8 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.08□□□□□ -0.47
VPS13BQ7Z7G8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC12.08□□□□□ -0.47
VPS13BQ7Z7G8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 SPDYE15P-201ENST00000424157 909 ntBASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 UNC93B7-201ENST00000509439 705 ntBASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 AC104692.2-201ENST00000603054 253 ntBASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 AC004951.3-201ENST00000418645 1148 ntBASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 HLA-G-202ENST00000376815 851 ntBASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 HLA-G-203ENST00000376818 1127 ntBASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 AC069148.1-201ENST00000608741 768 ntBASIC12.08□□□□□ -0.48
VPS13BQ7Z7G8 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 AP006587.1-201ENST00000534129 1502 ntBASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 TSPY17P-201ENST00000450329 467 ntBASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 HLA-A-209ENST00000638375 975 ntBASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 AC116562.4-202ENST00000641738 218 ntBASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 GXYLT1P4-201ENST00000613576 1192 ntBASIC12.07□□□□□ -0.48
VPS13BQ7Z7G8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms