Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 AP006294.2-201ENST00000641667 209 ntBASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LYSMD3Q7Z3D4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LYSMD3Q7Z3D4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
LYSMD3Q7Z3D4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LYSMD3Q7Z3D4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.59■□□□□ 0.73
LYSMD3Q7Z3D4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.59■□□□□ 0.73
LYSMD3Q7Z3D4 AL158211.5-201ENST00000623583 2518 ntBASIC19.59■□□□□ 0.73
LYSMD3Q7Z3D4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LYSMD3Q7Z3D4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LYSMD3Q7Z3D4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LYSMD3Q7Z3D4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LYSMD3Q7Z3D4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.59■□□□□ 0.73
LYSMD3Q7Z3D4 AC004264.1-201ENST00000608354 794 ntBASIC19.59■□□□□ 0.73
LYSMD3Q7Z3D4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LYSMD3Q7Z3D4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LYSMD3Q7Z3D4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LYSMD3Q7Z3D4 TREX1-205ENST00000625293 1783 ntBASIC19.59■□□□□ 0.73
LYSMD3Q7Z3D4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LYSMD3Q7Z3D4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LYSMD3Q7Z3D4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LYSMD3Q7Z3D4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.58■□□□□ 0.73
LYSMD3Q7Z3D4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.58■□□□□ 0.73
LYSMD3Q7Z3D4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LYSMD3Q7Z3D4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
LYSMD3Q7Z3D4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LYSMD3Q7Z3D4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LYSMD3Q7Z3D4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LYSMD3Q7Z3D4 AC087289.5-201ENST00000586076 3175 ntBASIC19.58■□□□□ 0.73
LYSMD3Q7Z3D4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.58■□□□□ 0.73
LYSMD3Q7Z3D4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LYSMD3Q7Z3D4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LYSMD3Q7Z3D4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LYSMD3Q7Z3D4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LYSMD3Q7Z3D4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.58■□□□□ 0.72
LYSMD3Q7Z3D4 TUBB8P6-201ENST00000436895 1288 ntBASIC19.58■□□□□ 0.72
LYSMD3Q7Z3D4 UBE2SP1-201ENST00000450587 669 ntBASIC19.58■□□□□ 0.72
LYSMD3Q7Z3D4 KRT16P5-201ENST00000455284 522 ntBASIC19.58■□□□□ 0.72
LYSMD3Q7Z3D4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.58■□□□□ 0.72
LYSMD3Q7Z3D4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.58■□□□□ 0.72
LYSMD3Q7Z3D4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
LYSMD3Q7Z3D4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LYSMD3Q7Z3D4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LYSMD3Q7Z3D4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LYSMD3Q7Z3D4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LYSMD3Q7Z3D4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.57■□□□□ 0.72
LYSMD3Q7Z3D4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms