Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC149Q6ZUS6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CCDC149Q6ZUS6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC149Q6ZUS6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
CCDC149Q6ZUS6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC149Q6ZUS6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC149Q6ZUS6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CCDC149Q6ZUS6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC149Q6ZUS6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC149Q6ZUS6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC149Q6ZUS6 AC096733.2-201ENST00000609937 1394 ntBASIC20.52■□□□□ 0.88
CCDC149Q6ZUS6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC149Q6ZUS6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC149Q6ZUS6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC149Q6ZUS6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CCDC149Q6ZUS6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC149Q6ZUS6 AC117947.1-201ENST00000427448 529 ntBASIC20.52■□□□□ 0.88
CCDC149Q6ZUS6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CCDC149Q6ZUS6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.52■□□□□ 0.88
CCDC149Q6ZUS6 MFAP1P1-201ENST00000442257 1255 ntBASIC20.52■□□□□ 0.88
CCDC149Q6ZUS6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC149Q6ZUS6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC149Q6ZUS6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC149Q6ZUS6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC149Q6ZUS6 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.52■□□□□ 0.88
CCDC149Q6ZUS6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC149Q6ZUS6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC149Q6ZUS6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CCDC149Q6ZUS6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC149Q6ZUS6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC149Q6ZUS6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC149Q6ZUS6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC149Q6ZUS6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC149Q6ZUS6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC149Q6ZUS6 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.51■□□□□ 0.87
CCDC149Q6ZUS6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC149Q6ZUS6 CCR12P-201ENST00000446203 998 ntBASIC20.51■□□□□ 0.87
CCDC149Q6ZUS6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC149Q6ZUS6 AC008040.2-201ENST00000461049 708 ntBASIC20.51■□□□□ 0.87
CCDC149Q6ZUS6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.51■□□□□ 0.87
CCDC149Q6ZUS6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC149Q6ZUS6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.51■□□□□ 0.87
CCDC149Q6ZUS6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC149Q6ZUS6 AC116562.4-202ENST00000641738 218 ntBASIC20.51■□□□□ 0.87
CCDC149Q6ZUS6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CCDC149Q6ZUS6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC149Q6ZUS6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC149Q6ZUS6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC149Q6ZUS6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC149Q6ZUS6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC149Q6ZUS6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC149Q6ZUS6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CCDC149Q6ZUS6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC149Q6ZUS6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC149Q6ZUS6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC149Q6ZUS6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC149Q6ZUS6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC149Q6ZUS6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC149Q6ZUS6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC149Q6ZUS6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CCDC149Q6ZUS6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC149Q6ZUS6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC149Q6ZUS6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC149Q6ZUS6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC149Q6ZUS6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC149Q6ZUS6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 RNF152P1-201ENST00000397754 604 ntBASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 FAM8A6P-201ENST00000407496 1135 ntBASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 SLC25A1P2-201ENST00000430693 912 ntBASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 AC091390.4-202ENST00000476426 537 ntBASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC149Q6ZUS6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.48■□□□□ 0.87
CCDC149Q6ZUS6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC149Q6ZUS6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC149Q6ZUS6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC149Q6ZUS6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC149Q6ZUS6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC149Q6ZUS6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC149Q6ZUS6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC149Q6ZUS6 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms