Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
CD109Q6YHK3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CD109Q6YHK3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CD109Q6YHK3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC29.79■■■□□ 2.36
CD109Q6YHK3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC29.79■■■□□ 2.36
CD109Q6YHK3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC29.79■■■□□ 2.36
CD109Q6YHK3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC29.79■■■□□ 2.36
CD109Q6YHK3 AL671883.3-201ENST00000603274 991 ntBASIC29.79■■■□□ 2.36
CD109Q6YHK3 AL024507.2-201ENST00000606070 2574 ntBASIC29.79■■■□□ 2.36
CD109Q6YHK3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
CD109Q6YHK3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CD109Q6YHK3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
CD109Q6YHK3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC29.79■■■□□ 2.36
CD109Q6YHK3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CD109Q6YHK3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CD109Q6YHK3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC29.79■■■□□ 2.36
CD109Q6YHK3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC29.79■■■□□ 2.36
CD109Q6YHK3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CD109Q6YHK3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CD109Q6YHK3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
CD109Q6YHK3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
CD109Q6YHK3 TSPY19P-201ENST00000418461 509 ntBASIC29.79■■■□□ 2.36
CD109Q6YHK3 TSPY18P-201ENST00000441642 509 ntBASIC29.79■■■□□ 2.36
CD109Q6YHK3 AC106795.1-205ENST00000512851 1056 ntBASIC29.79■■■□□ 2.36
CD109Q6YHK3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC29.79■■■□□ 2.36
CD109Q6YHK3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
CD109Q6YHK3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CD109Q6YHK3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CD109Q6YHK3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC29.79■■■□□ 2.36
CD109Q6YHK3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
CD109Q6YHK3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CD109Q6YHK3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC29.78■■■□□ 2.36
CD109Q6YHK3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC29.78■■■□□ 2.36
CD109Q6YHK3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CD109Q6YHK3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CD109Q6YHK3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CD109Q6YHK3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CD109Q6YHK3 MIR4674-201ENST00000582457 87 ntBASIC29.78■■■□□ 2.36
CD109Q6YHK3 SLC25A6P4-201ENST00000586535 553 ntBASIC29.78■■■□□ 2.36
CD109Q6YHK3 AP002414.4-201ENST00000589764 1148 ntBASIC29.78■■■□□ 2.36
CD109Q6YHK3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
CD109Q6YHK3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC29.78■■■□□ 2.36
CD109Q6YHK3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC29.78■■■□□ 2.36
CD109Q6YHK3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CD109Q6YHK3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC29.78■■■□□ 2.36
CD109Q6YHK3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC29.77■■■□□ 2.36
CD109Q6YHK3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CD109Q6YHK3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CD109Q6YHK3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CD109Q6YHK3 RASA4DP-201ENST00000460726 1199 ntBASIC29.77■■■□□ 2.36
CD109Q6YHK3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
CD109Q6YHK3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC29.76■■■□□ 2.36
CD109Q6YHK3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.36
CD109Q6YHK3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC29.76■■■□□ 2.36
CD109Q6YHK3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.36
CD109Q6YHK3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CD109Q6YHK3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC29.76■■■□□ 2.35
CD109Q6YHK3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CD109Q6YHK3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CD109Q6YHK3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC29.76■■■□□ 2.35
CD109Q6YHK3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
CD109Q6YHK3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC29.76■■■□□ 2.35
CD109Q6YHK3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC29.76■■■□□ 2.35
CD109Q6YHK3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC29.76■■■□□ 2.35
CD109Q6YHK3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.35
CD109Q6YHK3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC29.76■■■□□ 2.35
CD109Q6YHK3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
CD109Q6YHK3 LINC01465-201ENST00000408887 1940 ntBASIC29.76■■■□□ 2.35
CD109Q6YHK3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CD109Q6YHK3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CD109Q6YHK3 NME1-207ENST00000480143 964 ntTSL 2 BASIC29.75■■■□□ 2.35
CD109Q6YHK3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC29.75■■■□□ 2.35
CD109Q6YHK3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC29.75■■■□□ 2.35
CD109Q6YHK3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC29.75■■■□□ 2.35
CD109Q6YHK3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
CD109Q6YHK3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CD109Q6YHK3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CD109Q6YHK3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC29.74■■■□□ 2.35
CD109Q6YHK3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CD109Q6YHK3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CD109Q6YHK3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC29.74■■■□□ 2.35
CD109Q6YHK3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC29.74■■■□□ 2.35
CD109Q6YHK3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CD109Q6YHK3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
CD109Q6YHK3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC29.73■■■□□ 2.35
CD109Q6YHK3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC29.73■■■□□ 2.35
CD109Q6YHK3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC29.73■■■□□ 2.35
CD109Q6YHK3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC29.73■■■□□ 2.35
CD109Q6YHK3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CD109Q6YHK3 ECEL1P1-201ENST00000373592 1742 ntBASIC29.73■■■□□ 2.35
CD109Q6YHK3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CD109Q6YHK3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CD109Q6YHK3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CD109Q6YHK3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CD109Q6YHK3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CD109Q6YHK3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC29.72■■■□□ 2.35
CD109Q6YHK3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC29.72■■■□□ 2.35
CD109Q6YHK3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CD109Q6YHK3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CD109Q6YHK3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms