Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 MIR4785-201ENST00000585005 73 ntBASIC20.79■□□□□ 0.92
VSTM1Q6UX27 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.79■□□□□ 0.92
VSTM1Q6UX27 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.79■□□□□ 0.92
VSTM1Q6UX27 AC073195.1-201ENST00000607241 877 ntBASIC20.79■□□□□ 0.92
VSTM1Q6UX27 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VSTM1Q6UX27 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
VSTM1Q6UX27 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VSTM1Q6UX27 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VSTM1Q6UX27 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.79■□□□□ 0.92
VSTM1Q6UX27 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VSTM1Q6UX27 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.78■□□□□ 0.92
VSTM1Q6UX27 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.78■□□□□ 0.92
VSTM1Q6UX27 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VSTM1Q6UX27 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
VSTM1Q6UX27 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VSTM1Q6UX27 AP001271.2-201ENST00000624018 1556 ntBASIC20.78■□□□□ 0.92
VSTM1Q6UX27 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VSTM1Q6UX27 TSPY7P-201ENST00000431358 1114 ntBASIC20.78■□□□□ 0.92
VSTM1Q6UX27 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.78■□□□□ 0.92
VSTM1Q6UX27 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.78■□□□□ 0.92
VSTM1Q6UX27 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.78■□□□□ 0.92
VSTM1Q6UX27 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VSTM1Q6UX27 AP002982.1-201ENST00000492365 877 ntBASIC20.78■□□□□ 0.92
VSTM1Q6UX27 KRT18P16-201ENST00000510337 1294 ntBASIC20.78■□□□□ 0.92
VSTM1Q6UX27 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.78■□□□□ 0.92
VSTM1Q6UX27 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
VSTM1Q6UX27 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VSTM1Q6UX27 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VSTM1Q6UX27 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.78■□□□□ 0.92
VSTM1Q6UX27 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
VSTM1Q6UX27 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.78■□□□□ 0.92
VSTM1Q6UX27 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VSTM1Q6UX27 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VSTM1Q6UX27 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VSTM1Q6UX27 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
VSTM1Q6UX27 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
VSTM1Q6UX27 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.77■□□□□ 0.92
VSTM1Q6UX27 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.77■□□□□ 0.92
VSTM1Q6UX27 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.77■□□□□ 0.92
VSTM1Q6UX27 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VSTM1Q6UX27 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VSTM1Q6UX27 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.77■□□□□ 0.92
VSTM1Q6UX27 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
VSTM1Q6UX27 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VSTM1Q6UX27 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VSTM1Q6UX27 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.77■□□□□ 0.91
VSTM1Q6UX27 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
VSTM1Q6UX27 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
VSTM1Q6UX27 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
VSTM1Q6UX27 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
VSTM1Q6UX27 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.76■□□□□ 0.91
VSTM1Q6UX27 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.76■□□□□ 0.91
VSTM1Q6UX27 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VSTM1Q6UX27 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.76■□□□□ 0.91
VSTM1Q6UX27 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.76■□□□□ 0.91
VSTM1Q6UX27 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VSTM1Q6UX27 C1QL1P1-201ENST00000568105 661 ntBASIC20.76■□□□□ 0.91
VSTM1Q6UX27 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.76■□□□□ 0.91
VSTM1Q6UX27 CD177P1-201ENST00000606252 935 ntBASIC20.76■□□□□ 0.91
VSTM1Q6UX27 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
VSTM1Q6UX27 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.76■□□□□ 0.91
VSTM1Q6UX27 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VSTM1Q6UX27 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VSTM1Q6UX27 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VSTM1Q6UX27 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VSTM1Q6UX27 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VSTM1Q6UX27 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.76■□□□□ 0.91
VSTM1Q6UX27 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.76■□□□□ 0.91
VSTM1Q6UX27 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VSTM1Q6UX27 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
VSTM1Q6UX27 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
VSTM1Q6UX27 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.75■□□□□ 0.91
VSTM1Q6UX27 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
VSTM1Q6UX27 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VSTM1Q6UX27 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.75■□□□□ 0.91
VSTM1Q6UX27 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.75■□□□□ 0.91
VSTM1Q6UX27 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
VSTM1Q6UX27 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.75■□□□□ 0.91
VSTM1Q6UX27 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
VSTM1Q6UX27 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.75■□□□□ 0.91
VSTM1Q6UX27 NIFKP9-201ENST00000419265 221 ntBASIC20.75■□□□□ 0.91
VSTM1Q6UX27 TUBB8P6-201ENST00000436895 1288 ntBASIC20.75■□□□□ 0.91
VSTM1Q6UX27 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VSTM1Q6UX27 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.75■□□□□ 0.91
VSTM1Q6UX27 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.75■□□□□ 0.91
VSTM1Q6UX27 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VSTM1Q6UX27 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
VSTM1Q6UX27 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.75■□□□□ 0.91
VSTM1Q6UX27 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.75■□□□□ 0.91
VSTM1Q6UX27 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
VSTM1Q6UX27 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.74■□□□□ 0.91
VSTM1Q6UX27 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
VSTM1Q6UX27 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
VSTM1Q6UX27 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
VSTM1Q6UX27 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VSTM1Q6UX27 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VSTM1Q6UX27 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
VSTM1Q6UX27 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VSTM1Q6UX27 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VSTM1Q6UX27 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms