Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF220Q5VTB9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.73■□□□□ 0.59
RNF220Q5VTB9 AL162412.1-201ENST00000567129 965 ntBASIC18.73■□□□□ 0.59
RNF220Q5VTB9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF220Q5VTB9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RNF220Q5VTB9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.73■□□□□ 0.59
RNF220Q5VTB9 AC013268.1-206ENST00000638368 961 ntBASIC18.73■□□□□ 0.59
RNF220Q5VTB9 AC112229.1-201ENST00000639295 961 ntBASIC18.73■□□□□ 0.59
RNF220Q5VTB9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF220Q5VTB9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF220Q5VTB9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF220Q5VTB9 TREX1-205ENST00000625293 1783 ntBASIC18.73■□□□□ 0.59
RNF220Q5VTB9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF220Q5VTB9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.73■□□□□ 0.59
RNF220Q5VTB9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF220Q5VTB9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF220Q5VTB9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF220Q5VTB9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF220Q5VTB9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF220Q5VTB9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF220Q5VTB9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF220Q5VTB9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF220Q5VTB9 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF220Q5VTB9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF220Q5VTB9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
RNF220Q5VTB9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF220Q5VTB9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF220Q5VTB9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF220Q5VTB9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF220Q5VTB9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF220Q5VTB9 AL591742.1-201ENST00000604433 565 ntBASIC18.72■□□□□ 0.59
RNF220Q5VTB9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF220Q5VTB9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF220Q5VTB9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF220Q5VTB9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF220Q5VTB9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF220Q5VTB9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF220Q5VTB9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RNF220Q5VTB9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF220Q5VTB9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF220Q5VTB9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF220Q5VTB9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF220Q5VTB9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 AC137761.2-201ENST00000561729 223 ntBASIC18.71■□□□□ 0.59
RNF220Q5VTB9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 AC145350.3-201ENST00000569033 163 ntBASIC18.71■□□□□ 0.59
RNF220Q5VTB9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF220Q5VTB9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RNF220Q5VTB9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RNF220Q5VTB9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF220Q5VTB9 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF220Q5VTB9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF220Q5VTB9 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF220Q5VTB9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF220Q5VTB9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF220Q5VTB9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF220Q5VTB9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF220Q5VTB9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF220Q5VTB9 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RNF220Q5VTB9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF220Q5VTB9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF220Q5VTB9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF220Q5VTB9 PGM5P4-201ENST00000421970 445 ntBASIC18.7■□□□□ 0.58
RNF220Q5VTB9 AC026271.2-201ENST00000428091 497 ntBASIC18.7■□□□□ 0.58
RNF220Q5VTB9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF220Q5VTB9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF220Q5VTB9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.7■□□□□ 0.58
RNF220Q5VTB9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF220Q5VTB9 RARRES2P6-201ENST00000567333 442 ntBASIC18.7■□□□□ 0.58
RNF220Q5VTB9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RNF220Q5VTB9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF220Q5VTB9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF220Q5VTB9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RNF220Q5VTB9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms