Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CCDC18Q5T9S5 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC30.23■■■□□ 2.43
CCDC18Q5T9S5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
CCDC18Q5T9S5 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC18Q5T9S5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC18Q5T9S5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC30.22■■■□□ 2.43
CCDC18Q5T9S5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC18Q5T9S5 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC18Q5T9S5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC30.22■■■□□ 2.43
CCDC18Q5T9S5 PRSS44-201ENST00000515154 1146 ntBASIC30.22■■■□□ 2.43
CCDC18Q5T9S5 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC30.22■■■□□ 2.43
CCDC18Q5T9S5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
CCDC18Q5T9S5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC18Q5T9S5 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
CCDC18Q5T9S5 AL691432.2-201ENST00000607222 2038 ntBASIC30.22■■■□□ 2.43
CCDC18Q5T9S5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC30.22■■■□□ 2.43
CCDC18Q5T9S5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC30.22■■■□□ 2.43
CCDC18Q5T9S5 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CCDC18Q5T9S5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CCDC18Q5T9S5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
CCDC18Q5T9S5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC30.21■■■□□ 2.43
CCDC18Q5T9S5 RNF152P1-201ENST00000397754 604 ntBASIC30.21■■■□□ 2.43
CCDC18Q5T9S5 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC30.21■■■□□ 2.43
CCDC18Q5T9S5 COX11P1-201ENST00000489116 835 ntBASIC30.21■■■□□ 2.43
CCDC18Q5T9S5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC30.21■■■□□ 2.43
CCDC18Q5T9S5 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC30.21■■■□□ 2.43
CCDC18Q5T9S5 AC008622.2-201ENST00000617006 1229 ntBASIC30.21■■■□□ 2.43
CCDC18Q5T9S5 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC30.21■■■□□ 2.43
CCDC18Q5T9S5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC30.21■■■□□ 2.43
CCDC18Q5T9S5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
CCDC18Q5T9S5 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
CCDC18Q5T9S5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
CCDC18Q5T9S5 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC30.21■■■□□ 2.43
CCDC18Q5T9S5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC30.21■■■□□ 2.43
CCDC18Q5T9S5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
CCDC18Q5T9S5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CCDC18Q5T9S5 COPE-203ENST00000351079 907 ntTSL 2 BASIC30.2■■■□□ 2.43
CCDC18Q5T9S5 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
CCDC18Q5T9S5 CD70-202ENST00000423145 881 ntTSL 2 BASIC30.2■■■□□ 2.43
CCDC18Q5T9S5 AP003041.3-201ENST00000527151 707 ntBASIC30.2■■■□□ 2.43
CCDC18Q5T9S5 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC30.2■■■□□ 2.43
CCDC18Q5T9S5 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC30.2■■■□□ 2.43
CCDC18Q5T9S5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC30.2■■■□□ 2.43
CCDC18Q5T9S5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC30.2■■■□□ 2.43
CCDC18Q5T9S5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CCDC18Q5T9S5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
CCDC18Q5T9S5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC30.2■■■□□ 2.43
CCDC18Q5T9S5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CCDC18Q5T9S5 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC30.19■■■□□ 2.42
CCDC18Q5T9S5 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CCDC18Q5T9S5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC30.19■■■□□ 2.42
CCDC18Q5T9S5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC30.19■■■□□ 2.42
CCDC18Q5T9S5 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CCDC18Q5T9S5 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CCDC18Q5T9S5 KRT8P11-201ENST00000409686 1436 ntBASIC30.19■■■□□ 2.42
CCDC18Q5T9S5 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
CCDC18Q5T9S5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CCDC18Q5T9S5 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CCDC18Q5T9S5 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CCDC18Q5T9S5 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC30.19■■■□□ 2.42
CCDC18Q5T9S5 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC30.19■■■□□ 2.42
CCDC18Q5T9S5 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC30.19■■■□□ 2.42
CCDC18Q5T9S5 AL512604.3-201ENST00000569583 964 ntBASIC30.19■■■□□ 2.42
CCDC18Q5T9S5 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC18Q5T9S5 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC18Q5T9S5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC30.18■■■□□ 2.42
CCDC18Q5T9S5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC18Q5T9S5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC30.18■■■□□ 2.42
CCDC18Q5T9S5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC18Q5T9S5 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC30.18■■■□□ 2.42
CCDC18Q5T9S5 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC18Q5T9S5 GABARAPL3-202ENST00000624044 1851 ntBASIC30.18■■■□□ 2.42
CCDC18Q5T9S5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC18Q5T9S5 AL031133.1-201ENST00000406807 723 ntBASIC30.18■■■□□ 2.42
CCDC18Q5T9S5 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC30.18■■■□□ 2.42
CCDC18Q5T9S5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC18Q5T9S5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC30.18■■■□□ 2.42
CCDC18Q5T9S5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CCDC18Q5T9S5 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC30.18■■■□□ 2.42
CCDC18Q5T9S5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC30.17■■■□□ 2.42
CCDC18Q5T9S5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
CCDC18Q5T9S5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC18Q5T9S5 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC18Q5T9S5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
CCDC18Q5T9S5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
CCDC18Q5T9S5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC30.17■■■□□ 2.42
CCDC18Q5T9S5 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC18Q5T9S5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC30.17■■■□□ 2.42
CCDC18Q5T9S5 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC30.17■■■□□ 2.42
CCDC18Q5T9S5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC30.17■■■□□ 2.42
CCDC18Q5T9S5 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC30.17■■■□□ 2.42
CCDC18Q5T9S5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC30.17■■■□□ 2.42
CCDC18Q5T9S5 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC30.17■■■□□ 2.42
CCDC18Q5T9S5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC18Q5T9S5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC30.17■■■□□ 2.42
CCDC18Q5T9S5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
CCDC18Q5T9S5 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC18Q5T9S5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC18Q5T9S5 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC30.16■■■□□ 2.42
CCDC18Q5T9S5 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms