Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.03■□□□□ 0.64
CACNA1EQ15878 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.03■□□□□ 0.64
CACNA1EQ15878 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.03■□□□□ 0.64
CACNA1EQ15878 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CACNA1EQ15878 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
CACNA1EQ15878 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CACNA1EQ15878 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CACNA1EQ15878 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.03■□□□□ 0.64
CACNA1EQ15878 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CACNA1EQ15878 AP001271.2-201ENST00000624018 1556 ntBASIC19.03■□□□□ 0.64
CACNA1EQ15878 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CACNA1EQ15878 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CACNA1EQ15878 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CACNA1EQ15878 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.03■□□□□ 0.64
CACNA1EQ15878 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CACNA1EQ15878 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CACNA1EQ15878 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CACNA1EQ15878 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.03■□□□□ 0.64
CACNA1EQ15878 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.03■□□□□ 0.64
CACNA1EQ15878 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.03■□□□□ 0.64
CACNA1EQ15878 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CACNA1EQ15878 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.03■□□□□ 0.64
CACNA1EQ15878 BX119927.1-201ENST00000636596 1552 ntBASIC19.03■□□□□ 0.64
CACNA1EQ15878 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
CACNA1EQ15878 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CACNA1EQ15878 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CACNA1EQ15878 NEK4P2-201ENST00000580004 1012 ntBASIC19.02■□□□□ 0.64
CACNA1EQ15878 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CACNA1EQ15878 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CACNA1EQ15878 AC093458.2-201ENST00000623150 629 ntBASIC19.02■□□□□ 0.64
CACNA1EQ15878 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.02■□□□□ 0.64
CACNA1EQ15878 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CACNA1EQ15878 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CACNA1EQ15878 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CACNA1EQ15878 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CACNA1EQ15878 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.02■□□□□ 0.64
CACNA1EQ15878 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CACNA1EQ15878 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CACNA1EQ15878 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CACNA1EQ15878 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.02■□□□□ 0.64
CACNA1EQ15878 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.02■□□□□ 0.64
CACNA1EQ15878 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CACNA1EQ15878 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.02■□□□□ 0.64
CACNA1EQ15878 AL671277.2-201ENST00000458060 996 ntBASIC19.02■□□□□ 0.64
CACNA1EQ15878 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.02■□□□□ 0.64
CACNA1EQ15878 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.02■□□□□ 0.64
CACNA1EQ15878 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.02■□□□□ 0.64
CACNA1EQ15878 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.02■□□□□ 0.64
CACNA1EQ15878 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA1EQ15878 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA1EQ15878 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA1EQ15878 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.01■□□□□ 0.63
CACNA1EQ15878 AC092720.2-201ENST00000602388 1665 ntBASIC19.01■□□□□ 0.63
CACNA1EQ15878 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA1EQ15878 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA1EQ15878 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA1EQ15878 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.01■□□□□ 0.63
CACNA1EQ15878 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA1EQ15878 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CACNA1EQ15878 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA1EQ15878 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA1EQ15878 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.01■□□□□ 0.63
CACNA1EQ15878 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA1EQ15878 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.01■□□□□ 0.63
CACNA1EQ15878 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CACNA1EQ15878 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA1EQ15878 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA1EQ15878 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA1EQ15878 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.01■□□□□ 0.63
CACNA1EQ15878 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.01■□□□□ 0.63
CACNA1EQ15878 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.01■□□□□ 0.63
CACNA1EQ15878 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA1EQ15878 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CACNA1EQ15878 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA1EQ15878 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CACNA1EQ15878 KRT8P10-201ENST00000450021 1447 ntBASIC19■□□□□ 0.63
CACNA1EQ15878 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA1EQ15878 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CACNA1EQ15878 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA1EQ15878 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA1EQ15878 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19■□□□□ 0.63
CACNA1EQ15878 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CACNA1EQ15878 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19■□□□□ 0.63
CACNA1EQ15878 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19■□□□□ 0.63
CACNA1EQ15878 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19■□□□□ 0.63
CACNA1EQ15878 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19■□□□□ 0.63
CACNA1EQ15878 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19■□□□□ 0.63
CACNA1EQ15878 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19■□□□□ 0.63
CACNA1EQ15878 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA1EQ15878 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA1EQ15878 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA1EQ15878 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CACNA1EQ15878 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19■□□□□ 0.63
CACNA1EQ15878 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19■□□□□ 0.63
CACNA1EQ15878 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA1EQ15878 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19■□□□□ 0.63
CACNA1EQ15878 LINC01465-201ENST00000408887 1940 ntBASIC19■□□□□ 0.63
CACNA1EQ15878 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA1EQ15878 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19■□□□□ 0.63
CACNA1EQ15878 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms