Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
CX3CL1P78423 AP001271.2-201ENST00000624018 1556 ntBASIC15.7■□□□□ 0.1
CX3CL1P78423 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CX3CL1P78423 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CX3CL1P78423 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CX3CL1P78423 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CX3CL1P78423 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CX3CL1P78423 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.69■□□□□ 0.1
CX3CL1P78423 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.69■□□□□ 0.1
CX3CL1P78423 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.69■□□□□ 0.1
CX3CL1P78423 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CX3CL1P78423 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CX3CL1P78423 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.69■□□□□ 0.1
CX3CL1P78423 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CX3CL1P78423 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CX3CL1P78423 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.69■□□□□ 0.1
CX3CL1P78423 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.69■□□□□ 0.1
CX3CL1P78423 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.69■□□□□ 0.1
CX3CL1P78423 AC008687.6-201ENST00000596318 630 ntBASIC15.69■□□□□ 0.1
CX3CL1P78423 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CX3CL1P78423 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.69■□□□□ 0.1
CX3CL1P78423 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.69■□□□□ 0.1
CX3CL1P78423 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CX3CL1P78423 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.69■□□□□ 0.1
CX3CL1P78423 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CX3CL1P78423 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CX3CL1P78423 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CX3CL1P78423 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CX3CL1P78423 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CX3CL1P78423 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.68■□□□□ 0.1
CX3CL1P78423 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CL1P78423 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CL1P78423 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.68■□□□□ 0.1
CX3CL1P78423 AC124283.5-201ENST00000624661 1809 ntBASIC15.68■□□□□ 0.1
CX3CL1P78423 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CL1P78423 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.68■□□□□ 0.1
CX3CL1P78423 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CL1P78423 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CL1P78423 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CL1P78423 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CL1P78423 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CX3CL1P78423 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CL1P78423 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.68■□□□□ 0.1
CX3CL1P78423 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CL1P78423 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.68■□□□□ 0.1
CX3CL1P78423 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CX3CL1P78423 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CL1P78423 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.68■□□□□ 0.1
CX3CL1P78423 AC116351.2-201ENST00000606540 1585 ntBASIC15.68■□□□□ 0.1
CX3CL1P78423 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CL1P78423 AC018553.1-201ENST00000616682 1458 ntBASIC15.68■□□□□ 0.1
CX3CL1P78423 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CL1P78423 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CL1P78423 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CX3CL1P78423 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CX3CL1P78423 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CX3CL1P78423 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CL1P78423 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.68■□□□□ 0.1
CX3CL1P78423 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.68■□□□□ 0.1
CX3CL1P78423 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.68■□□□□ 0.1
CX3CL1P78423 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.68■□□□□ 0.1
CX3CL1P78423 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CL1P78423 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CL1P78423 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CL1P78423 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CL1P78423 TNXA-203ENST00000507684 2038 ntBASIC15.68■□□□□ 0.1
CX3CL1P78423 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CL1P78423 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CX3CL1P78423 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CL1P78423 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CL1P78423 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CL1P78423 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CL1P78423 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CL1P78423 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CL1P78423 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CL1P78423 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
CX3CL1P78423 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CL1P78423 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CL1P78423 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CX3CL1P78423 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CL1P78423 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CL1P78423 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CL1P78423 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CL1P78423 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.67■□□□□ 0.1
CX3CL1P78423 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CL1P78423 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.67■□□□□ 0.1
CX3CL1P78423 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.67■□□□□ 0.1
CX3CL1P78423 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.67■□□□□ 0.1
CX3CL1P78423 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CX3CL1P78423 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CL1P78423 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CL1P78423 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.67■□□□□ 0.1
CX3CL1P78423 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CL1P78423 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.67■□□□□ 0.1
CX3CL1P78423 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CL1P78423 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CL1P78423 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.67■□□□□ 0.1
CX3CL1P78423 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.67■□□□□ 0.1
CX3CL1P78423 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.67■□□□□ 0.1
CX3CL1P78423 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms