Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRA2BP62995 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRA2BP62995 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TRA2BP62995 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
TRA2BP62995 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRA2BP62995 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.42■□□□□ 0.54
TRA2BP62995 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.42■□□□□ 0.54
TRA2BP62995 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRA2BP62995 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRA2BP62995 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRA2BP62995 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRA2BP62995 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRA2BP62995 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRA2BP62995 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRA2BP62995 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRA2BP62995 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRA2BP62995 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRA2BP62995 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRA2BP62995 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRA2BP62995 AL032819.2-201ENST00000624543 2162 ntBASIC18.41■□□□□ 0.54
TRA2BP62995 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRA2BP62995 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.41■□□□□ 0.54
TRA2BP62995 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.41■□□□□ 0.54
TRA2BP62995 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRA2BP62995 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRA2BP62995 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRA2BP62995 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRA2BP62995 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.41■□□□□ 0.54
TRA2BP62995 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
TRA2BP62995 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRA2BP62995 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRA2BP62995 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
TRA2BP62995 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRA2BP62995 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRA2BP62995 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.41■□□□□ 0.54
TRA2BP62995 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.41■□□□□ 0.54
TRA2BP62995 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRA2BP62995 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.41■□□□□ 0.54
TRA2BP62995 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.41■□□□□ 0.54
TRA2BP62995 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TRA2BP62995 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRA2BP62995 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRA2BP62995 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRA2BP62995 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRA2BP62995 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRA2BP62995 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRA2BP62995 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRA2BP62995 NBPF21P-201ENST00000425093 1451 ntBASIC18.4■□□□□ 0.54
TRA2BP62995 BX323043.1-201ENST00000641006 1765 ntBASIC18.4■□□□□ 0.54
TRA2BP62995 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
TRA2BP62995 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRA2BP62995 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRA2BP62995 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRA2BP62995 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.4■□□□□ 0.54
TRA2BP62995 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.4■□□□□ 0.54
TRA2BP62995 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TRA2BP62995 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRA2BP62995 AC004264.1-201ENST00000608354 794 ntBASIC18.4■□□□□ 0.54
TRA2BP62995 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.4■□□□□ 0.54
TRA2BP62995 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.4■□□□□ 0.54
TRA2BP62995 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRA2BP62995 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRA2BP62995 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRA2BP62995 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRA2BP62995 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.4■□□□□ 0.54
TRA2BP62995 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TRA2BP62995 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRA2BP62995 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRA2BP62995 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRA2BP62995 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRA2BP62995 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.39■□□□□ 0.54
TRA2BP62995 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
TRA2BP62995 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRA2BP62995 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
TRA2BP62995 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
TRA2BP62995 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRA2BP62995 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TRA2BP62995 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TRA2BP62995 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.39■□□□□ 0.53
TRA2BP62995 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.39■□□□□ 0.53
TRA2BP62995 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRA2BP62995 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRA2BP62995 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRA2BP62995 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRA2BP62995 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.39■□□□□ 0.53
TRA2BP62995 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.39■□□□□ 0.53
TRA2BP62995 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.39■□□□□ 0.53
TRA2BP62995 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.39■□□□□ 0.53
TRA2BP62995 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRA2BP62995 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TRA2BP62995 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TRA2BP62995 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRA2BP62995 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRA2BP62995 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRA2BP62995 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRA2BP62995 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRA2BP62995 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRA2BP62995 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
TRA2BP62995 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRA2BP62995 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms