Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
AP3S2P59780 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S2P59780 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
AP3S2P59780 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.75■□□□□ 0.27
AP3S2P59780 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S2P59780 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S2P59780 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.75■□□□□ 0.27
AP3S2P59780 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
AP3S2P59780 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S2P59780 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.75■□□□□ 0.27
AP3S2P59780 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S2P59780 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
AP3S2P59780 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.75■□□□□ 0.27
AP3S2P59780 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S2P59780 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S2P59780 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.75■□□□□ 0.27
AP3S2P59780 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S2P59780 WIZP1-201ENST00000531444 2299 ntBASIC16.75■□□□□ 0.27
AP3S2P59780 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S2P59780 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3S2P59780 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S2P59780 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S2P59780 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S2P59780 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S2P59780 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.74■□□□□ 0.27
AP3S2P59780 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
AP3S2P59780 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.74■□□□□ 0.27
AP3S2P59780 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
AP3S2P59780 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
AP3S2P59780 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S2P59780 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S2P59780 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S2P59780 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.74■□□□□ 0.27
AP3S2P59780 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.74■□□□□ 0.27
AP3S2P59780 AL358852.1-201ENST00000623174 1268 ntBASIC16.74■□□□□ 0.27
AP3S2P59780 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
AP3S2P59780 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S2P59780 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S2P59780 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S2P59780 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.74■□□□□ 0.27
AP3S2P59780 Z98044.1-201ENST00000632503 1764 ntBASIC16.74■□□□□ 0.27
AP3S2P59780 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3S2P59780 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.74■□□□□ 0.27
AP3S2P59780 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S2P59780 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S2P59780 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.73■□□□□ 0.27
AP3S2P59780 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S2P59780 BICD1-207ENST00000551848 1962 ntBASIC16.73■□□□□ 0.27
AP3S2P59780 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
AP3S2P59780 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S2P59780 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S2P59780 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S2P59780 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S2P59780 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S2P59780 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S2P59780 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S2P59780 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S2P59780 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S2P59780 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
AP3S2P59780 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
AP3S2P59780 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S2P59780 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S2P59780 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S2P59780 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.73■□□□□ 0.27
AP3S2P59780 NOC2LP1-202ENST00000452600 2235 ntBASIC16.73■□□□□ 0.27
AP3S2P59780 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
AP3S2P59780 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S2P59780 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S2P59780 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3S2P59780 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S2P59780 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S2P59780 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S2P59780 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S2P59780 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
AP3S2P59780 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S2P59780 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S2P59780 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S2P59780 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
AP3S2P59780 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S2P59780 AL354751.1-201ENST00000412768 1863 ntBASIC16.72■□□□□ 0.27
AP3S2P59780 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S2P59780 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.72■□□□□ 0.27
AP3S2P59780 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S2P59780 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S2P59780 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
AP3S2P59780 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S2P59780 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.72■□□□□ 0.27
AP3S2P59780 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
AP3S2P59780 AC138907.5-202ENST00000569484 235 ntBASIC16.72■□□□□ 0.27
AP3S2P59780 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S2P59780 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S2P59780 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S2P59780 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S2P59780 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
AP3S2P59780 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.72■□□□□ 0.27
AP3S2P59780 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3S2P59780 AP000997.3-201ENST00000623333 2250 ntBASIC16.72■□□□□ 0.27
AP3S2P59780 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.72■□□□□ 0.27
AP3S2P59780 AL133373.2-201ENST00000623187 2828 ntBASIC16.72■□□□□ 0.27
AP3S2P59780 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms