Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH4P55283 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDH4P55283 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDH4P55283 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CDH4P55283 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.98■□□□□ 0.79
CDH4P55283 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDH4P55283 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH4P55283 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH4P55283 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDH4P55283 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH4P55283 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH4P55283 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH4P55283 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH4P55283 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
CDH4P55283 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.98■□□□□ 0.79
CDH4P55283 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
CDH4P55283 MIR4785-201ENST00000585005 73 ntBASIC19.98■□□□□ 0.79
CDH4P55283 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDH4P55283 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDH4P55283 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CDH4P55283 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH4P55283 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH4P55283 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CDH4P55283 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH4P55283 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.97■□□□□ 0.79
CDH4P55283 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.97■□□□□ 0.79
CDH4P55283 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH4P55283 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDH4P55283 PCDHAC2-203ENST00000615316 3011 ntBASIC19.97■□□□□ 0.79
CDH4P55283 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CDH4P55283 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH4P55283 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.97■□□□□ 0.79
CDH4P55283 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDH4P55283 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH4P55283 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.97■□□□□ 0.79
CDH4P55283 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH4P55283 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH4P55283 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH4P55283 KRT17P2-201ENST00000300992 1314 ntBASIC19.97■□□□□ 0.79
CDH4P55283 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.97■□□□□ 0.79
CDH4P55283 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH4P55283 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH4P55283 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH4P55283 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH4P55283 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CDH4P55283 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.96■□□□□ 0.79
CDH4P55283 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH4P55283 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH4P55283 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CDH4P55283 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.96■□□□□ 0.79
CDH4P55283 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.96■□□□□ 0.79
CDH4P55283 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.96■□□□□ 0.79
CDH4P55283 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
CDH4P55283 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.96■□□□□ 0.79
CDH4P55283 AC026471.5-201ENST00000615068 467 ntBASIC19.96■□□□□ 0.79
CDH4P55283 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH4P55283 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH4P55283 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH4P55283 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH4P55283 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH4P55283 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
CDH4P55283 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.79
CDH4P55283 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.79
CDH4P55283 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH4P55283 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH4P55283 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CDH4P55283 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDH4P55283 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH4P55283 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDH4P55283 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.95■□□□□ 0.78
CDH4P55283 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
CDH4P55283 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH4P55283 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDH4P55283 AL355355.2-201ENST00000442321 338 ntBASIC19.95■□□□□ 0.78
CDH4P55283 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDH4P55283 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH4P55283 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH4P55283 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDH4P55283 AC131212.4-201ENST00000623606 975 ntBASIC19.95■□□□□ 0.78
CDH4P55283 AL031985.4-201ENST00000642138 673 ntBASIC19.95■□□□□ 0.78
CDH4P55283 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH4P55283 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDH4P55283 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH4P55283 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH4P55283 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CDH4P55283 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CDH4P55283 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.95■□□□□ 0.78
CDH4P55283 AC073130.3-201ENST00000624389 2278 ntBASIC19.95■□□□□ 0.78
CDH4P55283 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDH4P55283 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.95■□□□□ 0.78
CDH4P55283 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH4P55283 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH4P55283 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDH4P55283 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH4P55283 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH4P55283 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH4P55283 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH4P55283 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.94■□□□□ 0.78
CDH4P55283 AC004980.1-204ENST00000429707 299 ntBASIC19.94■□□□□ 0.78
CDH4P55283 NUDT16P1-203ENST00000513809 620 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms