Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TUBP50607 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.55■□□□□ 0.88
TUBP50607 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.54■□□□□ 0.88
TUBP50607 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBP50607 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
TUBP50607 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
TUBP50607 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TUBP50607 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBP50607 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TUBP50607 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBP50607 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TUBP50607 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBP50607 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBP50607 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBP50607 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TUBP50607 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TUBP50607 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.54■□□□□ 0.88
TUBP50607 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.54■□□□□ 0.88
TUBP50607 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.54■□□□□ 0.88
TUBP50607 AP002982.1-201ENST00000492365 877 ntBASIC20.54■□□□□ 0.88
TUBP50607 KRT18P16-201ENST00000510337 1294 ntBASIC20.54■□□□□ 0.88
TUBP50607 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TUBP50607 C1QL1P1-201ENST00000568105 661 ntBASIC20.54■□□□□ 0.88
TUBP50607 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.54■□□□□ 0.88
TUBP50607 CD177P1-201ENST00000606252 935 ntBASIC20.54■□□□□ 0.88
TUBP50607 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TUBP50607 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBP50607 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TUBP50607 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBP50607 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.54■□□□□ 0.88
TUBP50607 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBP50607 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TUBP50607 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBP50607 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TUBP50607 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TUBP50607 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TUBP50607 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBP50607 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBP50607 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.53■□□□□ 0.88
TUBP50607 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.53■□□□□ 0.88
TUBP50607 NIFKP9-201ENST00000419265 221 ntBASIC20.53■□□□□ 0.88
TUBP50607 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.53■□□□□ 0.88
TUBP50607 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TUBP50607 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBP50607 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBP50607 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TUBP50607 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBP50607 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBP50607 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBP50607 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TUBP50607 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.53■□□□□ 0.88
TUBP50607 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.53■□□□□ 0.88
TUBP50607 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TUBP50607 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.53■□□□□ 0.88
TUBP50607 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TUBP50607 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBP50607 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TUBP50607 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.52■□□□□ 0.88
TUBP50607 AP001271.2-201ENST00000624018 1556 ntBASIC20.52■□□□□ 0.88
TUBP50607 AC112907.3-201ENST00000577781 2400 ntBASIC20.52■□□□□ 0.88
TUBP50607 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TUBP50607 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.52■□□□□ 0.88
TUBP50607 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.52■□□□□ 0.88
TUBP50607 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TUBP50607 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TUBP50607 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TUBP50607 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TUBP50607 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.52■□□□□ 0.88
TUBP50607 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.52■□□□□ 0.88
TUBP50607 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBP50607 KSR1P1-201ENST00000446298 240 ntBASIC20.52■□□□□ 0.88
TUBP50607 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TUBP50607 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBP50607 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.52■□□□□ 0.88
TUBP50607 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.52■□□□□ 0.88
TUBP50607 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.52■□□□□ 0.88
TUBP50607 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.52■□□□□ 0.88
TUBP50607 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
TUBP50607 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.52■□□□□ 0.88
TUBP50607 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.52■□□□□ 0.88
TUBP50607 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBP50607 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBP50607 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TUBP50607 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TUBP50607 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBP50607 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TUBP50607 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.51■□□□□ 0.87
TUBP50607 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBP50607 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TUBP50607 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
TUBP50607 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TUBP50607 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBP50607 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.51■□□□□ 0.87
TUBP50607 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBP50607 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TUBP50607 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBP50607 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.51■□□□□ 0.87
TUBP50607 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TUBP50607 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.51■□□□□ 0.87
TUBP50607 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms