Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.16■□□□□ 0.98
TNFSF9P41273 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.16■□□□□ 0.98
TNFSF9P41273 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.16■□□□□ 0.98
TNFSF9P41273 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.16■□□□□ 0.98
TNFSF9P41273 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.16■□□□□ 0.98
TNFSF9P41273 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF9P41273 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF9P41273 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.16■□□□□ 0.98
TNFSF9P41273 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
TNFSF9P41273 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF9P41273 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF9P41273 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TNFSF9P41273 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.15■□□□□ 0.98
TNFSF9P41273 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
TNFSF9P41273 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TNFSF9P41273 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.15■□□□□ 0.98
TNFSF9P41273 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.15■□□□□ 0.98
TNFSF9P41273 TSPY15P-201ENST00000457163 923 ntBASIC21.15■□□□□ 0.98
TNFSF9P41273 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.15■□□□□ 0.98
TNFSF9P41273 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TNFSF9P41273 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TNFSF9P41273 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.15■□□□□ 0.98
TNFSF9P41273 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.15■□□□□ 0.98
TNFSF9P41273 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TNFSF9P41273 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
TNFSF9P41273 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.14■□□□□ 0.98
TNFSF9P41273 KRT16P1-201ENST00000399124 1418 ntBASIC21.14■□□□□ 0.98
TNFSF9P41273 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TNFSF9P41273 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TNFSF9P41273 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TNFSF9P41273 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.14■□□□□ 0.97
TNFSF9P41273 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TNFSF9P41273 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TNFSF9P41273 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.14■□□□□ 0.97
TNFSF9P41273 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.14■□□□□ 0.97
TNFSF9P41273 AC026471.5-201ENST00000615068 467 ntBASIC21.14■□□□□ 0.97
TNFSF9P41273 AL445675.2-201ENST00000620291 557 ntBASIC21.14■□□□□ 0.97
TNFSF9P41273 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.14■□□□□ 0.97
TNFSF9P41273 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
TNFSF9P41273 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TNFSF9P41273 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.14■□□□□ 0.97
TNFSF9P41273 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TNFSF9P41273 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TNFSF9P41273 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TNFSF9P41273 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TNFSF9P41273 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.13■□□□□ 0.97
TNFSF9P41273 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TNFSF9P41273 TREX1-205ENST00000625293 1783 ntBASIC21.13■□□□□ 0.97
TNFSF9P41273 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TNFSF9P41273 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TNFSF9P41273 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TNFSF9P41273 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.13■□□□□ 0.97
TNFSF9P41273 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TNFSF9P41273 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.13■□□□□ 0.97
TNFSF9P41273 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
TNFSF9P41273 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TNFSF9P41273 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.13■□□□□ 0.97
TNFSF9P41273 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TNFSF9P41273 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
TNFSF9P41273 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.13■□□□□ 0.97
TNFSF9P41273 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TNFSF9P41273 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TNFSF9P41273 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF9P41273 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.12■□□□□ 0.97
TNFSF9P41273 AL158211.5-201ENST00000623583 2518 ntBASIC21.12■□□□□ 0.97
TNFSF9P41273 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF9P41273 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF9P41273 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.12■□□□□ 0.97
TNFSF9P41273 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF9P41273 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TNFSF9P41273 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF9P41273 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.12■□□□□ 0.97
TNFSF9P41273 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF9P41273 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
TNFSF9P41273 AC004980.1-204ENST00000429707 299 ntBASIC21.12■□□□□ 0.97
TNFSF9P41273 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TNFSF9P41273 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.12■□□□□ 0.97
TNFSF9P41273 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF9P41273 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.12■□□□□ 0.97
TNFSF9P41273 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF9P41273 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF9P41273 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF9P41273 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF9P41273 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.12■□□□□ 0.97
TNFSF9P41273 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF9P41273 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF9P41273 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF9P41273 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TNFSF9P41273 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
TNFSF9P41273 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
TNFSF9P41273 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TNFSF9P41273 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.11■□□□□ 0.97
TNFSF9P41273 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TNFSF9P41273 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.11■□□□□ 0.97
TNFSF9P41273 NUDT16P1-203ENST00000513809 620 ntBASIC21.11■□□□□ 0.97
TNFSF9P41273 AL355075.4-201ENST00000554988 638 ntBASIC21.11■□□□□ 0.97
TNFSF9P41273 AP003071.4-201ENST00000562276 1284 ntBASIC21.11■□□□□ 0.97
TNFSF9P41273 MIR4785-201ENST00000585005 73 ntBASIC21.11■□□□□ 0.97
TNFSF9P41273 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TNFSF9P41273 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms