Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 KRT19P1-201ENST00000405746 1186 ntBASIC22.13■■□□□ 1.13
CLCN1P35523 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.13■■□□□ 1.13
CLCN1P35523 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.13■■□□□ 1.13
CLCN1P35523 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.13■■□□□ 1.13
CLCN1P35523 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CLCN1P35523 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.13■■□□□ 1.13
CLCN1P35523 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.13■■□□□ 1.13
CLCN1P35523 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.13■■□□□ 1.13
CLCN1P35523 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC22.13■■□□□ 1.13
CLCN1P35523 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLCN1P35523 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CLCN1P35523 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.13■■□□□ 1.13
CLCN1P35523 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLCN1P35523 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CLCN1P35523 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLCN1P35523 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
CLCN1P35523 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CLCN1P35523 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLCN1P35523 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CLCN1P35523 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLCN1P35523 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLCN1P35523 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLCN1P35523 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLCN1P35523 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLCN1P35523 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLCN1P35523 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.12■■□□□ 1.13
CLCN1P35523 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.12■■□□□ 1.13
CLCN1P35523 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLCN1P35523 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CLCN1P35523 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.12■■□□□ 1.13
CLCN1P35523 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLCN1P35523 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
CLCN1P35523 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLCN1P35523 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLCN1P35523 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC22.12■■□□□ 1.13
CLCN1P35523 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLCN1P35523 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC22.12■■□□□ 1.13
CLCN1P35523 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CLCN1P35523 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CLCN1P35523 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CLCN1P35523 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLCN1P35523 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLCN1P35523 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLCN1P35523 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLCN1P35523 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLCN1P35523 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
CLCN1P35523 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC22.11■■□□□ 1.13
CLCN1P35523 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC22.11■■□□□ 1.13
CLCN1P35523 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
CLCN1P35523 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CLCN1P35523 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CLCN1P35523 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.11■■□□□ 1.13
CLCN1P35523 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.11■■□□□ 1.13
CLCN1P35523 SLC7A5P1-201ENST00000568957 537 ntBASIC22.11■■□□□ 1.13
CLCN1P35523 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLCN1P35523 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.11■■□□□ 1.13
CLCN1P35523 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLCN1P35523 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC22.11■■□□□ 1.13
CLCN1P35523 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CLCN1P35523 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLCN1P35523 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.11■■□□□ 1.13
CLCN1P35523 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC22.11■■□□□ 1.13
CLCN1P35523 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN1P35523 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN1P35523 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN1P35523 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN1P35523 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN1P35523 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.1■■□□□ 1.13
CLCN1P35523 AC245052.3-201ENST00000450182 901 ntBASIC22.1■■□□□ 1.13
CLCN1P35523 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.1■■□□□ 1.13
CLCN1P35523 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.1■■□□□ 1.13
CLCN1P35523 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN1P35523 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC22.1■■□□□ 1.13
CLCN1P35523 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN1P35523 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
CLCN1P35523 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN1P35523 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN1P35523 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN1P35523 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN1P35523 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN1P35523 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN1P35523 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
CLCN1P35523 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN1P35523 EFTUD1P1-204ENST00000560401 1798 ntBASIC22.1■■□□□ 1.13
CLCN1P35523 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC22.1■■□□□ 1.13
CLCN1P35523 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN1P35523 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
CLCN1P35523 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CLCN1P35523 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CLCN1P35523 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
CLCN1P35523 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CLCN1P35523 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CLCN1P35523 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.09■■□□□ 1.13
CLCN1P35523 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC22.09■■□□□ 1.13
CLCN1P35523 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.09■■□□□ 1.13
CLCN1P35523 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
CLCN1P35523 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CLCN1P35523 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC22.09■■□□□ 1.13
CLCN1P35523 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CLCN1P35523 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms