Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTNNA1P35221 AC018553.1-201ENST00000616682 1458 ntBASIC20.58■□□□□ 0.89
CTNNA1P35221 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.58■□□□□ 0.89
CTNNA1P35221 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTNNA1P35221 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTNNA1P35221 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CTNNA1P35221 LSM12P1-201ENST00000411836 588 ntBASIC20.58■□□□□ 0.89
CTNNA1P35221 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTNNA1P35221 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.58■□□□□ 0.89
CTNNA1P35221 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTNNA1P35221 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTNNA1P35221 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CTNNA1P35221 AC116351.2-201ENST00000606540 1585 ntBASIC20.58■□□□□ 0.88
CTNNA1P35221 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTNNA1P35221 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CTNNA1P35221 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTNNA1P35221 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTNNA1P35221 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTNNA1P35221 AIRN-201ENST00000601203 4374 ntBASIC20.57■□□□□ 0.88
CTNNA1P35221 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTNNA1P35221 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.57■□□□□ 0.88
CTNNA1P35221 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTNNA1P35221 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTNNA1P35221 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTNNA1P35221 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTNNA1P35221 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTNNA1P35221 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTNNA1P35221 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
CTNNA1P35221 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTNNA1P35221 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTNNA1P35221 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.57■□□□□ 0.88
CTNNA1P35221 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.57■□□□□ 0.88
CTNNA1P35221 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.57■□□□□ 0.88
CTNNA1P35221 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTNNA1P35221 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.57■□□□□ 0.88
CTNNA1P35221 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTNNA1P35221 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTNNA1P35221 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.56■□□□□ 0.88
CTNNA1P35221 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTNNA1P35221 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.56■□□□□ 0.88
CTNNA1P35221 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTNNA1P35221 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTNNA1P35221 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.56■□□□□ 0.88
CTNNA1P35221 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.56■□□□□ 0.88
CTNNA1P35221 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTNNA1P35221 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTNNA1P35221 AC092437.1-201ENST00000624794 1048 ntBASIC20.56■□□□□ 0.88
CTNNA1P35221 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTNNA1P35221 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTNNA1P35221 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.56■□□□□ 0.88
CTNNA1P35221 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTNNA1P35221 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
CTNNA1P35221 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTNNA1P35221 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTNNA1P35221 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CTNNA1P35221 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTNNA1P35221 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTNNA1P35221 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTNNA1P35221 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTNNA1P35221 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTNNA1P35221 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTNNA1P35221 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.55■□□□□ 0.88
CTNNA1P35221 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.55■□□□□ 0.88
CTNNA1P35221 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTNNA1P35221 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CTNNA1P35221 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.55■□□□□ 0.88
CTNNA1P35221 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.55■□□□□ 0.88
CTNNA1P35221 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.55■□□□□ 0.88
CTNNA1P35221 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CTNNA1P35221 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTNNA1P35221 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.55■□□□□ 0.88
CTNNA1P35221 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.55■□□□□ 0.88
CTNNA1P35221 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.55■□□□□ 0.88
CTNNA1P35221 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTNNA1P35221 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTNNA1P35221 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTNNA1P35221 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTNNA1P35221 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CTNNA1P35221 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTNNA1P35221 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CTNNA1P35221 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTNNA1P35221 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNNA1P35221 AC138932.1-201ENST00000534164 6830 ntBASIC20.54■□□□□ 0.88
CTNNA1P35221 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNNA1P35221 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTNNA1P35221 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.54■□□□□ 0.88
CTNNA1P35221 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.54■□□□□ 0.88
CTNNA1P35221 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNNA1P35221 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.54■□□□□ 0.88
CTNNA1P35221 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.54■□□□□ 0.88
CTNNA1P35221 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CTNNA1P35221 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNNA1P35221 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.54■□□□□ 0.88
CTNNA1P35221 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTNNA1P35221 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.54■□□□□ 0.88
CTNNA1P35221 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.54■□□□□ 0.88
CTNNA1P35221 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.54■□□□□ 0.88
CTNNA1P35221 AL050303.2-201ENST00000619798 666 ntBASIC20.54■□□□□ 0.88
CTNNA1P35221 AC073111.5-205ENST00000641717 521 ntBASIC20.54■□□□□ 0.88
CTNNA1P35221 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms